Gene: Lsat_1_v5_gn_7_85120
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_7_85120
- Transcript Identifier Lsat_1_v5_gn_7_85120.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_7 : 142460564-142468845 : positive
Gene Family Information
- ID HOM05D002857
- #Genes/#Species 242/100
- Phylogenetic origin
- ID ORTHO05D007919
- #Genes/#Species 125/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_7_85120.v5
- pacid 38910813
Descriptions
- Description K03511 - DNA polymerase kappa (POLK)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006281 | IEA | InterPro | DNA repair | |
GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003684 | IEA | InterPro | damaged DNA binding | |
GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
GO:0003697 | ISO | PLAZA Integrative Orthology | single-stranded DNA binding | AT1G49980 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR001126 | UmuC domain |
IPR036775 | DNA polymerase, Y-family, little finger domain superfamily |
IPR043502 | DNA/RNA polymerase superfamily |
IPR001000 | Glycoside hydrolase family 10 domain |
IPR017853 | Glycoside hydrolase superfamily |
IPR022880 | DNA polymerase IV |
IPR017961 | DNA polymerase, Y-family, little finger domain |
IPR041298 | DNA polymerase eta, ubiquitin-binding zinc finger |
IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
Mapman id | Description |
---|---|
14.2.3 | DNA damage response.DNA repair polymerase activities.DNA polymerase kappa (POLK) |