Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p13740 Brassica napus
A02p25470 Brassica napus
A03p09880 Brassica napus
A03p29820 Brassica napus
A09p26750 Brassica napus
Aa31LG4G12710 Aethionema arabicum
Aa31LG4G12720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.172 Anthoceros agrestis
Actinidia07428 Actinidia chinensis
Actinidia13164 Actinidia chinensis
Actinidia21993 Actinidia chinensis
Actinidia26394 Actinidia chinensis
Actinidia40466 Actinidia chinensis
Ah.09g233520 Amaranthus hybridus
AL6G31710 Arabidopsis lyrata
AL6G47560 Arabidopsis lyrata
AL7G31230 Arabidopsis lyrata
Aqoxy1G00798 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.211B66 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4NI6I Arachis hypogaea
AT4G12600 Arabidopsis thaliana
AT4G22380 Arabidopsis thaliana
AT5G20160 Arabidopsis thaliana
ATR0618G381 Amborella trichopoda
ATR0804G019 Amborella trichopoda
Atru.chr13.2221 Acer truncatum
Atru.chr3.1855 Acer truncatum
Atru.chr7.1225 Acer truncatum
AUR62011121 Chenopodium quinoa
AUR62013370 Chenopodium quinoa
BcaB01g01756 Brassica carinata
BcaB01g02624 Brassica carinata
BcaB05g23734 Brassica carinata
BcaB08g36544 Brassica carinata
BcaC01g04578 Brassica carinata
BcaC03g16263 Brassica carinata
BcaC04g19407 Brassica carinata
BcaC04g21247 Brassica carinata
BcaC09g51101 Brassica carinata
BolC1t01612H Brassica oleracea
BolC2t10079H Brassica oleracea
BolC3t13618H Brassica oleracea
BolC3t15917H Brassica oleracea
BolC9t58471H Brassica oleracea
BraA01t01319Z Brassica rapa
BraA02t07535Z Brassica rapa
BraA03t10301Z Brassica rapa
BraA03t12172Z Brassica rapa
BraA09t38247Z Brassica rapa
C01p16650 Brassica napus
C02p40530 Brassica napus
C03p11440 Brassica napus
C03p36080 Brassica napus
C09p33880 Brassica napus
C09p56040 Brassica napus
CAN.G230.3 Capsicum annuum
CAN.G230.4 Capsicum annuum
CAN.G230.9 Capsicum annuum
CAN.G697.4 Capsicum annuum
CANSAT11G2471 Cannabis sativa
CARHR192670 Cardamine hirsuta
CARHR229290 Cardamine hirsuta
CARHR253570 Cardamine hirsuta
Carub.0006s1854 Capsella rubella
Carub.0006s1855 Capsella rubella
Carub.0006s3187 Capsella rubella
Carub.0007s1892 Capsella rubella
Ca_02671_v3 Cicer arietinum L.
CBR_g477 Chara braunii
Cc06_g08600 Coffea canephora
CDE05G2571 Ceratophyllum demersum
CDE05G2732 Ceratophyllum demersum
Ciclev10009899m.g Citrus clementina
Ciclev10017168m.g Citrus clementina
CiPaw.03G243300 Carya illinoinensis
ClCG06G011020 Citrullus lanatus
ClCG11G002970 Citrullus lanatus
COL.COLO4_07527 Corchorus olitorius
Cpa.g.sc75.43 Carica papaya
Cre06.g249250 Chlamydomonas reinhardtii
CsaV3_2G002790 Cucumis sativus L.
CSS0018316 Camellia sinensis var. sinensis
CSS0020311 Camellia sinensis var. sinensis
DCAR_028813 Daucus carota
Dinv35544 Davidia involucrata
Dinv36532 Davidia involucrata
Dinv37118 Davidia involucrata
Duzib114G0961 Durio zibethinus
Duzib187G1828 Durio zibethinus
ECA234G0314 Erigeron canadensis
ECA240G3036 Erigeron canadensis
EL10Ac8g18640 Beta vulgaris
Eucgr.C01159 Eucalyptus grandis
Eucgr.C04195 Eucalyptus grandis
FAN19G0297 Fragaria x ananassa
FAN23G0099 Fragaria x ananassa
FAN26G0290 Fragaria x ananassa
FAN28G0713 Fragaria x ananassa
FvH4_1g03460 Fragaria vesca
Glyma.02G229800 Glycine max
Glyma.13G167800 Glycine max
Glyma.14G196700 Glycine max
Glyma.17G115400 Glycine max
Gohir.A06G056600 Gossypium hirsutum
Gohir.A08G238900 Gossypium hirsutum
Gohir.D06G055000 Gossypium hirsutum
Gohir.D08G259600 Gossypium hirsutum
Gorai.004G277400 Gossypium raimondii
Gorai.010G064300 Gossypium raimondii
GSVIVG01015520001 Vitis vinifera
GSVIVG01016438001 Vitis vinifera
HanXRQChr09g0242291 Helianthus annuus
HanXRQChr10g0315451 Helianthus annuus
HanXRQChr10g0315471 Helianthus annuus
HanXRQChr12g0356331 Helianthus annuus
Haze_20880 Corylus avellana
Haze_20889 Corylus avellana
Haze_27686 Corylus avellana
Hma1.2p1_0073F.1_g038560 Hydrangea macrophylla
Hma1.2p1_1521F.1_g288630 Hydrangea macrophylla
HPP92_010463 Vanilla planifolia
HPP92_017406 Vanilla planifolia
HPP92_017418 Vanilla planifolia
Hund09134 Selenicereus undatus
Lalb_Chr01g0011811 Lupinus albus
Lalb_Chr25g0278621 Lupinus albus
Lj1g0027472 Lotus japonicus
Lj5C228T13 Lonicera japonica
Lj6g0016322 Lotus japonicus
Lsat_1_v5_gn_2_131541 Lactuca sativa
Lsat_1_v5_gn_5_97280 Lactuca sativa
Lsat_1_v5_gn_8_59100 Lactuca sativa
Manes.06G048900 Manihot esculenta
Manes.14G131800 Manihot esculenta
Mapoly0003s0247 Marchantia polymorpha
MBI02_g12518_MAGBIO Magnolia biondii
MBI02_g15891_MAGBIO Magnolia biondii
MBI18_g28221_MAGBIO Magnolia biondii
MCO11G796 Micromonas commoda
MD02G1033700 Malus domestica
MD15G1174500 Malus domestica
Medtr0011s0330 Medicago truncatula
Medtr4g114330 Medicago truncatula
MELO3C004514.2 Cucumis melo
MELO3C010355.2 Cucumis melo
Migut.D02563 Erythranthe guttata
Migut.D02587 Erythranthe guttata
Migut.N00556 Erythranthe guttata
MSTRG.12795 Avicennia marina
MSTRG.18022 Avicennia marina
MSTRG.20938 Avicennia marina
Nitab4.5_0000119g0410 Nicotiana tabacum
Nitab4.5_0000362g0170 Nicotiana tabacum
Nitab4.5_0001385g0090 Nicotiana tabacum
Nitab4.5_0008116g0020 Nicotiana tabacum
Nitab4.5_0009380g0010 Nicotiana tabacum
Nn2g11285 Nelumbo nucifera
Nn2g13526 Nelumbo nucifera
Oeu001837.1 Olea europaea
Oeu013159.1 Olea europaea
Oeu030553.1 Olea europaea
Os03g0241200 Oryza sativa ssp. japonica
Os10g0124000 Oryza sativa ssp. japonica
Peaxi162Scf00014g01621 Petunia axillaris
Peaxi162Scf00038g00822 Petunia axillaris
Peaxi162Scf00038g00823 Petunia axillaris
Peaxi162Scf00975g00130 Petunia axillaris
PGR142G2863 Punica granatum
PGSC0003DMG400024264 Solanum tuberosum
PGSC0003DMG400026414 Solanum tuberosum
Phvul.003G163950 Phaseolus vulgaris
Phvul.008G269000 Phaseolus vulgaris
Potri.013G116800 Populus trichocarpa
Potri.019G087100 Populus trichocarpa
Pp3c14_21860 Physcomitrium patens
Pp3c17_18010 Physcomitrium patens
Pp3c17_18050 Physcomitrium patens
Pp3c1_37110 Physcomitrium patens
PRCOL_00001961 Prasinoderma coloniale
Prupe.5G003200 Prunus persica
Prupe.7G241400 Prunus persica
Psat1g027160 Pisum sativum
Psat3g048640 Pisum sativum
Psat4g038640 Pisum sativum
PSO339G3638 Papaver somniferum
PSO339G4056 Papaver somniferum
PSO384G0595 Papaver somniferum
QL02p088196 Quercus lobata
RcHm_v2.0_Chr2g0088681 Rosa chinensis
Rhsim01G0073000 Rhododendron simsii
Rhsim01G0073800 Rhododendron simsii
Sabra13G0098900 Salix brachista
Sabra19G0097600 Salix brachista
Sabra19G0101100 Salix brachista
SalBow1G1255 Salvia bowleyana
SalBow2G1329 Salvia bowleyana
SalBow3G4417 Salvia bowleyana
Sc08g0006680 Simmondsia chinensis
Sc18g0000630 Simmondsia chinensis
Sed0005229 Sechium edule
Sed0009803 Sechium edule
Sed0027011 Sechium edule
SEGI_01504 Sequoiadendron giganteum
SEGI_23989 Sequoiadendron giganteum
SGA_v2.0_scaffold3G01671 Striga asiatica
SGA_v2.0_scaffold6G03310 Striga asiatica
SMO327G0021 Selaginella moellendorffii
SMO364G0635 Selaginella moellendorffii
Solyc09g011420.3 Solanum lycopersicum
Sopen09g006150 Solanum pennellii
Sopen09g034950 Solanum pennellii
Sp6g04910 Schrenkiella parvula
Sp6g24250 Schrenkiella parvula
Sp7g20510 Schrenkiella parvula
TAR369G0132 Trochodendron aralioides
TAR383G0378 Trochodendron aralioides
TAR625G0003 Trochodendron aralioides
TAR633G1360 Trochodendron aralioides
TAR636G0842 Trochodendron aralioides
TAR636G0909 Trochodendron aralioides
THA.LOC104799743 Tarenaya hassleriana
THA.LOC104811033 Tarenaya hassleriana
Thecc.09G125300 Theobroma cacao
Thhalv10015017m.g Eutrema salsugineum
Thhalv10026563m.g Eutrema salsugineum
Thhalv10029067m.g Eutrema salsugineum
TPR.G10722 Trifolium pratense
TPR.G21261 Trifolium pratense
TWI32G1036 Tripterygium wilfordii
TWI53G1874 Tripterygium wilfordii
TWI63G0307 Tripterygium wilfordii
TWI74G0062 Tripterygium wilfordii
TWI77G0371 Tripterygium wilfordii
unitig_32.g10953 Utricularia gibba
unitig_748.g8156 Utricularia gibba
unitig_85.g27429 Utricularia gibba
vmacro06127 Vaccinium macrocarpon
vmacro20549 Vaccinium macrocarpon
VMungo0647G0461 Vigna mungo
VMungo1215G2726 Vigna mungo
Zm00001eb010300 Zea mays
Zm00001eb136210 Zea mays
Zm00001eb141200 Zea mays
Zm00001eb166300 Zea mays
Zm00001eb203290 Zea mays
Zm00001eb281950 Zea mays
Zm00001eb399010 Zea mays
Zm00001eb433140 Zea mays

User provided reference genes

Program Settings