Gene: Sopen09g034950
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g034950
- Transcript Identifier Sopen09g034950.1
- Gene Type Coding gene
- Location Spenn-ch09 : 82936432-82938479 : positive
Gene Family Information
- ID HOM05D002783
- #Genes/#Species 248/98
- Phylogenetic origin
- ID ORTHO05D003055
- #Genes/#Species 246/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen09g034950.1
Descriptions
- Description Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | FUNCTIONS IN: RNA binding | INVOLVED IN: ribosome biogenesis | LOCATED IN: nucleolus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote , Ribosomal protein L7Ae/L8/Nhp2 family , Ribosomal protein L7Ae/L30e/S12e/Gadd45 , Ribosomal protein L7Ae conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | IEA | InterPro | nucleolus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.3.4 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (NHP2L1/SNU13) |
| 17.1.1.2.1.5.4 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.component Snu13 |