Gene: Ah.09g233520

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.09g233520
  • Transcript Identifier Ah.09g233520-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_9 : 18192236-18194230 : positive

Gene Family Information

  • ID HOM05D002783
  • #Genes/#Species 248/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.09g233520-v1.1.a1

Descriptions

  • Description NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (U4/U6.U5 small nuclear ribonucleoprotein SNU13) (U4/U6.U5 tri-snRNP 15.5 kDa protein)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
InterPronucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 50S ribosomal protein L30e-like
IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family
IPR002415 H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
Mapman id Description
16.2.1.3.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (NHP2L1/SNU13)
17.1.1.2.1.5.4 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.component Snu13