Gene: Lj5C228T13
General Information
Structural Information
- Species Lonicera japonica
- Gene Identifier Lj5C228T13
- Transcript Identifier Lj5C228T13.1
- Gene Type Coding gene
- Location GWHAAZE00000005 : 22815526-22819301 : negative
Gene Family Information
- ID HOM05D002783
- #Genes/#Species 248/98
- Phylogenetic origin
- ID ORTHO05D003055
- #Genes/#Species 246/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Lj5C228T13.1
- Accession GWHGAAZE018680
- Accession GWHTAAZE018702
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | IEA | InterPro | nucleolus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002415 | H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote |
| IPR036236 | Zinc finger C2H2 superfamily |
| IPR004345 | TB2/DP1/HVA22-related protein |
| IPR029064 | 50S ribosomal protein L30e-like |
| IPR003604 | Matrin/U1-C-like, C2H2-type zinc finger |
| IPR004038 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 |
| IPR018492 | Ribosomal protein L7Ae/L8/Nhp2 family |
| Mapman id | Description |
|---|---|
| 16.2.1.3.4 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (NHP2L1/SNU13) |
| 17.1.1.2.1.5.4 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.component Snu13 |