Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06800 Brassica napus
A03p60790 Brassica napus
A08p18590 Brassica napus
Aa31LG2G18850 Aethionema arabicum
Aa31LG3G12990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2187 Anthoceros agrestis
Actinidia06426 Actinidia chinensis
Actinidia21640 Actinidia chinensis
Actinidia21641 Actinidia chinensis
Actinidia21871 Actinidia chinensis
Ah.15g094460 Amaranthus hybridus
Ah.15g094470 Amaranthus hybridus
AL7G20570 Arabidopsis lyrata
AL7G20580 Arabidopsis lyrata
AL8G33000 Arabidopsis lyrata
Aqoxy7G02902 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CAI2GC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3FQSU Arachis hypogaea
AT4G31480 Arabidopsis thaliana
AT4G31490 Arabidopsis thaliana
ATR0605G160 Amborella trichopoda
Atru.chr7.2652 Acer truncatum
AUR62001362 Chenopodium quinoa
AUR62025639 Chenopodium quinoa
BcaB03g12701 Brassica carinata
BcaC01g01084 Brassica carinata
BcaC09g51929 Brassica carinata
BcaC09g51930 Brassica carinata
BcaNung01520 Brassica carinata
BcaNung04131 Brassica carinata
BcaNung04137 Brassica carinata
BcaNung04585 Brassica carinata
BolC1t00732H Brassica oleracea
BolC1t00734H Brassica oleracea
BolC1t00735H Brassica oleracea
BolC3t21103H Brassica oleracea
BolC7t46318H Brassica oleracea
BolC9t57725H Brassica oleracea
BraA01t00632Z Brassica rapa
BraA03t15115Z Brassica rapa
BraA08t33822Z Brassica rapa
C01p07510 Brassica napus
C01p07530 Brassica napus
C01p07540 Brassica napus
C03p87910 Brassica napus
C07p58680 Brassica napus
C09p48780 Brassica napus
CAN.G1245.6 Capsicum annuum
CAN.G574.20 Capsicum annuum
CANSAT01G0591 Cannabis sativa
CANSAT78G0511 Cannabis sativa
CARHR239370 Cardamine hirsuta
CARHR270860 Cardamine hirsuta
Carub.0007s0907 Capsella rubella
Ca_20943_v3 Cicer arietinum L.
CBR_g28522 Chara braunii
Cc06_g06520 Coffea canephora
CDE02G0294 Ceratophyllum demersum
CDE06G0721 Ceratophyllum demersum
CDE06G0728 Ceratophyllum demersum
CDE06G1417 Ceratophyllum demersum
CDE06G1421 Ceratophyllum demersum
CDE06G2723 Ceratophyllum demersum
Cfa002130 Carpinus fangiana
Cfa008673 Carpinus fangiana
Cfa026522 Carpinus fangiana
Ciclev10007364m.g Citrus clementina
Ciclev10010393m.g Citrus clementina
CiPaw.01G111600 Carya illinoinensis
CiPaw.02G061900 Carya illinoinensis
ClCG07G014160 Citrullus lanatus
COL.COLO4_08705 Corchorus olitorius
COL.COLO4_19025 Corchorus olitorius
Cpa.g.c32953.1 Carica papaya
Cpa.g.sc23.22 Carica papaya
Cpa.g.sc23.23 Carica papaya
Cpa.g.sc2829.1 Carica papaya
Cre04.g217921 Chlamydomonas reinhardtii
CsaV3_3G031230 Cucumis sativus L.
CsaV3_UNG227880 Cucumis sativus L.
CSS0015666 Camellia sinensis var. sinensis
CSS0031588 Camellia sinensis var. sinensis
DCAR_001480 Daucus carota
DCAR_010116 Daucus carota
DCAR_010118 Daucus carota
Dinv12239 Davidia involucrata
Dinv13263 Davidia involucrata
Dinv20355 Davidia involucrata
Dinv37791 Davidia involucrata
Dinv37792 Davidia involucrata
Duzib150G0346 Durio zibethinus
Duzib168G1430 Durio zibethinus
Duzib187G0469 Durio zibethinus
ECA238G0466 Erigeron canadensis
ECA246G1695 Erigeron canadensis
EL10Ac7g18185 Beta vulgaris
Eucgr.F04015 Eucalyptus grandis
FAN02G0266 Fragaria x ananassa
FAN05G3905 Fragaria x ananassa
FAN05G5692 Fragaria x ananassa
FAN07G0450 Fragaria x ananassa
FAN09G1928 Fragaria x ananassa
FAN09G2571 Fragaria x ananassa
FAN12G3531 Fragaria x ananassa
FAN14G5936 Fragaria x ananassa
FAN17G0966 Fragaria x ananassa
FAN22G1127 Fragaria x ananassa
FvH4_4g12700 Fragaria vesca
FvH4_6g37230 Fragaria vesca
Glyma.07G004100 Glycine max
Glyma.08G222400 Glycine max
Gohir.A05G063700 Gossypium hirsutum
Gohir.A06G105400 Gossypium hirsutum
Gohir.A13G178300 Gossypium hirsutum
Gohir.D05G066300 Gossypium hirsutum
Gohir.D06G107500 Gossypium hirsutum
Gohir.D13G186400 Gossypium hirsutum
Gorai.009G067100 Gossypium raimondii
Gorai.010G122200 Gossypium raimondii
Gorai.010G122400 Gossypium raimondii
Gorai.010G245600 Gossypium raimondii
GSVIVG01016151001 Vitis vinifera
GSVIVG01035511001 Vitis vinifera
HanXRQChr01g0002951 Helianthus annuus
HanXRQChr04g0094101 Helianthus annuus
HanXRQChr07g0191691 Helianthus annuus
HanXRQChr07g0191701 Helianthus annuus
HanXRQChr14g0444941 Helianthus annuus
Haze_11693 Corylus avellana
Haze_16309 Corylus avellana
Haze_27691 Corylus avellana
Hma1.2p1_2167F.1_g315890 Hydrangea macrophylla
HPP92_021939 Vanilla planifolia
HPP92_021940 Vanilla planifolia
HPP92_021966 Vanilla planifolia
Hund05099 Selenicereus undatus
Hund18599 Selenicereus undatus
Lalb_Chr01g0011801 Lupinus albus
Lalb_Chr04g0264691 Lupinus albus
Lalb_Chr25g0278631 Lupinus albus
Lj3g0008227 Lotus japonicus
Lj7A748T60 Lonicera japonica
Lj9A541T95 Lonicera japonica
Lsat_1_v5_gn_2_65680 Lactuca sativa
Lsat_1_v5_gn_3_66800 Lactuca sativa
Lsat_1_v5_gn_4_123541 Lactuca sativa
Manes.03G004100 Manihot esculenta
Manes.16G135200 Manihot esculenta
Mapoly0086s0049 Marchantia polymorpha
MBI11_g00103_MAGBIO Magnolia biondii
MBI14_g02607_MAGBIO Magnolia biondii
MBI14_g10731_MAGBIO Magnolia biondii
MBI14_g36208_MAGBIO Magnolia biondii
MBI16_g09349_MAGBIO Magnolia biondii
MBI16_g42768_MAGBIO Magnolia biondii
MBI18_g15612_MAGBIO Magnolia biondii
MCO07G642 Micromonas commoda
MD04G1023700 Malus domestica
MD09G1159400 Malus domestica
MD13G1280100 Malus domestica
MD17G1145600 Malus domestica
Medtr0576s0010 Medicago truncatula
Medtr2g074950 Medicago truncatula
Medtr3g008780 Medicago truncatula
Medtr3g024060 Medicago truncatula
Medtr3g071150 Medicago truncatula
Medtr4g008250 Medicago truncatula
Medtr4g132130 Medicago truncatula
Medtr4g132140 Medicago truncatula
Medtr5g019590 Medicago truncatula
Medtr6g044465 Medicago truncatula
Medtr6g046370 Medicago truncatula
Medtr6g051970 Medicago truncatula
Medtr6g089270 Medicago truncatula
Medtr7g112920 Medicago truncatula
Medtr7g112940 Medicago truncatula
Medtr8g470140 Medicago truncatula
MELO3C025796.2 Cucumis melo
Migut.F01870 Erythranthe guttata
Migut.F02132 Erythranthe guttata
MSTRG.330 Avicennia marina
MSTRG.8208 Avicennia marina
Nitab4.5_0000020g0050 Nicotiana tabacum
Nitab4.5_0001287g0030 Nicotiana tabacum
Nitab4.5_0002858g0060 Nicotiana tabacum
Nitab4.5_0004070g0090 Nicotiana tabacum
Nitab4.5_0004452g0010 Nicotiana tabacum
Nn1g02788 Nelumbo nucifera
Nn3g19670 Nelumbo nucifera
Nn8g40641 Nelumbo nucifera
Oeu010161.1 Olea europaea
Oeu023177.1 Olea europaea
Oeu040500.1 Olea europaea
Oeu046891.1 Olea europaea
Os01g0281400 Oryza sativa ssp. japonica
Os11g0174000 Oryza sativa ssp. japonica
Peaxi162Scf00211g00089 Petunia axillaris
Peaxi162Scf00586g00015 Petunia axillaris
PGR031G0093 Punica granatum
PGR102G1533 Punica granatum
PGSC0003DMG400028234 Solanum tuberosum
PGSC0003DMG401021320 Solanum tuberosum
PGSC0003DMG402021320 Solanum tuberosum
Phvul.008G255400 Phaseolus vulgaris
Potri.006G273300 Populus trichocarpa
Potri.018G007400 Populus trichocarpa
Pp3c11_24980 Physcomitrium patens
Pp3c25_10770 Physcomitrium patens
Pp3c6_720 Physcomitrium patens
Pp3c7_8430 Physcomitrium patens
PRCOL_00005009 Prasinoderma coloniale
Prupe.3G018100 Prunus persica
Prupe.3G018300 Prunus persica
Prupe.3G018400 Prunus persica
Psat7g261280 Pisum sativum
PSO063G1484 Papaver somniferum
PSO170G2949 Papaver somniferum
PSO339G4471 Papaver somniferum
PSO384G0083 Papaver somniferum
PSO801G0437 Papaver somniferum
QL05p083025 Quercus lobata
QL06p028396 Quercus lobata
RcHm_v2.0_Chr2g0149941 Rosa chinensis
RcHm_v2.0_Chr2g0149961 Rosa chinensis
RcHm_v2.0_Chr2g0149991 Rosa chinensis
RcHm_v2.0_Chr4g0411591 Rosa chinensis
Rhsim02G0104200 Rhododendron simsii
Rhsim08G0248400 Rhododendron simsii
Sabra06G0211700 Salix brachista
Sabra18G0014900 Salix brachista
SalBow1G1230 Salvia bowleyana
SalBow6G0622 Salvia bowleyana
Sc10g0008030 Simmondsia chinensis
Sc15g0000950 Simmondsia chinensis
Sed0012302 Sechium edule
Sed0014430 Sechium edule
SEGI_01924 Sequoiadendron giganteum
SEGI_17202 Sequoiadendron giganteum
SEGI_18277 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33182 Striga asiatica
SGA_v2.0_scaffold62G21499 Striga asiatica
SMO147G0233 Selaginella moellendorffii
SMO348G0069 Selaginella moellendorffii
Solyc01g007150.3 Solanum lycopersicum
Solyc10g081920.2 Solanum lycopersicum
Sopen01g003130 Solanum pennellii
Sopen10g032430 Solanum pennellii
Sp6g18820 Schrenkiella parvula
Sp7g29340 Schrenkiella parvula
TAR383G1093 Trochodendron aralioides
TAR626G1027 Trochodendron aralioides
TAR626G1609 Trochodendron aralioides
TAR626G1906 Trochodendron aralioides
THA.LOC104811761 Tarenaya hassleriana
THA.LOC104813500 Tarenaya hassleriana
THA.LOC104825369 Tarenaya hassleriana
Thecc.09G008000 Theobroma cacao
Thhalv10024334m.g Eutrema salsugineum
TPR.G15712 Trifolium pratense
TPR.G18881 Trifolium pratense
TPR.G18882 Trifolium pratense
TPR.G23061 Trifolium pratense
TWI31G0448 Tripterygium wilfordii
TWI79G1746 Tripterygium wilfordii
unitig_26.g9577 Utricularia gibba
unitig_749.g13494 Utricularia gibba
vmacro05124 Vaccinium macrocarpon
vmacro18759 Vaccinium macrocarpon
VMungo0647G1624 Vigna mungo
Zm00001eb049180 Zea mays
Zm00001eb091670 Zea mays
Zm00001eb129320 Zea mays
Zm00001eb332530 Zea mays
Zm00001eb418350 Zea mays

User provided reference genes

Program Settings