Gene: PGSC0003DMG401021320

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401021320
  • Transcript Identifier PGSC0003DMT400054937
  • Gene Type Coding gene
  • Location ST4.03ch01 : 3126494-3128635 : negative

Gene Family Information

  • ID HOM05D002483
  • #Genes/#Species 274/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37437997
  • id PGSC0003DMG401021320.v4.03
  • uniprot M1BX30

Descriptions

  • Description Coatomer subunit beta-1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006888
IBA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891
IBA
GOA Databaseintra-Golgi vesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
ISO
PLAZA Homology (enrichment)structural molecule activity HOM05D002483

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0030117
IEA
GOA Databasemembrane coat
GO:0030117
IEA
InterPromembrane coat
GO:0016020
IEA
GOA Databasemembrane
GO:0030126
IBA
GOA DatabaseCOPI vesicle coat
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G31480
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G31480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016460 Coatomer beta subunit (COPB1)
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
Mapman id Description
22.2.1.1.4.1 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit beta