Gene: SGA_v2.0_scaffold62G21499

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold62G21499
  • Transcript Identifier SGA_v2.0_scaffold62T21499
  • Gene Type Coding gene
  • Location scaffold62 : 1196110-1207636 : negative

Gene Family Information

  • ID HOM05D002483
  • #Genes/#Species 274/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Coatomer, beta subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005198
IEA
InterProstructural molecule activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030126
IEA
InterProCOPI vesicle coat
GO:0005737
IEA
InterProcytoplasm
GO:0030117
IEA
InterPromembrane coat
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G36230

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043510 BZW1/2, W2 domain
IPR003307 W2 domain
IPR016024 Armadillo-type fold
IPR016021 MIF4G-like domain superfamily
IPR029446 Coatomer beta subunit, appendage platform domain
IPR011710 Coatomer beta subunit, C-terminal
IPR016460 Coatomer beta subunit (COPB1)
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 Armadillo-like helical
Mapman id Description
17.4.1.2.4 Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF2 Met-tRNA binding factor activity.eIF2-regulatory factor (eIF5C)
22.2.1.1.4.1 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit beta