Gene: SGA_v2.0_scaffold62G21499
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold62G21499
- Transcript Identifier SGA_v2.0_scaffold62T21499
- Gene Type Coding gene
- Location scaffold62 : 1196110-1207636 : negative
Gene Family Information
- ID HOM05D002483
- #Genes/#Species 274/99
- Phylogenetic origin
- ID ORTHO05D004557
- #Genes/#Species 177/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Coatomer, beta subunit
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006886 | IEA | InterPro | intracellular protein transport | |
GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0005198 | IEA | InterPro | structural molecule activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0030126 | IEA | InterPro | COPI vesicle coat | |
GO:0005737 | IEA | InterPro | cytoplasm | |
GO:0030117 | IEA | InterPro | membrane coat | |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G36230 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR043510 | BZW1/2, W2 domain |
IPR003307 | W2 domain |
IPR016024 | Armadillo-type fold |
IPR016021 | MIF4G-like domain superfamily |
IPR029446 | Coatomer beta subunit, appendage platform domain |
IPR011710 | Coatomer beta subunit, C-terminal |
IPR016460 | Coatomer beta subunit (COPB1) |
IPR002553 | Clathrin/coatomer adaptor, adaptin-like, N-terminal |
IPR011989 | Armadillo-like helical |
Mapman id | Description |
---|---|
17.4.1.2.4 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF2 Met-tRNA binding factor activity.eIF2-regulatory factor (eIF5C) |
22.2.1.1.4.1 | Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit beta |