Gene: Sopen10g032430

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g032430
  • Transcript Identifier Sopen10g032430.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 79751158-79756197 : negative

Gene Family Information

  • ID HOM05D002483
  • #Genes/#Species 274/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g032430.1

Descriptions

  • Description Coatomer, beta subunit | FUNCTIONS IN: clathrin binding, structural molecule activity, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: membrane coat, COPI vesicle coat | EXPRESSED IN: male gametophyte, guard cell | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Coatomer, beta subunit, C-terminal , Armadillo-like helical , Coatomer, beta subunit , Armadillo-type fold , Clathrin/coatomer adaptor, adaptin-like, N-terminal | BEST Arabidopsis thaliana protein match is: Coatomer, beta subunit ., Coatomer, beta subunit, C-terminal
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
InterProstructural molecule activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0030126
IEA
InterProCOPI vesicle coat
GO:0030117
IEA
InterPromembrane coat
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G31480
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G31480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016460 Coatomer beta subunit (COPB1)
IPR011710 Coatomer beta subunit, C-terminal
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989 Armadillo-like helical
IPR029446 Coatomer beta subunit, appendage platform domain
IPR016024 Armadillo-type fold
Mapman id Description
22.2.1.1.4.1 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit beta