Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16890 Brassica napus
A02p11790 Brassica napus
A03p56180 Brassica napus
A08p21070 Brassica napus
A10p10020 Brassica napus
A10p10030 Brassica napus
Aa31LG3G8840 Aethionema arabicum
Aa31LG7G11740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5183 Anthoceros agrestis
Actinidia10561 Actinidia chinensis
Actinidia20869 Actinidia chinensis
Actinidia34144 Actinidia chinensis
Ah.07g206770 Amaranthus hybridus
Ah.13g069040 Amaranthus hybridus
AL7G27460 Arabidopsis lyrata
AL8G26910 Arabidopsis lyrata
AL8G26940 Arabidopsis lyrata
Aqoxy5G04017 Aquilegia oxysepala
Aqoxy7G00270 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3GQW45 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4A0KTI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8L1G2M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FGM9QK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KY2C7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8PJJY Arachis hypogaea
AT4G25630 Arabidopsis thaliana
AT5G52470 Arabidopsis thaliana
AT5G52490 Arabidopsis thaliana
ATR0680G265 Amborella trichopoda
ATR1089G045 Amborella trichopoda
Atru.chr11.1141 Acer truncatum
AUR62021142 Chenopodium quinoa
AUR62031396 Chenopodium quinoa
BcaB01g02234 Brassica carinata
BcaB03g12478 Brassica carinata
BcaB03g14904 Brassica carinata
BcaB05g21962 Brassica carinata
BcaB08g35602 Brassica carinata
BcaC03g14527 Brassica carinata
BcaC04g20584 Brassica carinata
BcaC06g32791 Brassica carinata
BcaC06g32792 Brassica carinata
BcaC07g38203 Brassica carinata
BcaC09g50751 Brassica carinata
BcaNung03705 Brassica carinata
BolC1t02041H Brassica oleracea
BolC2t08099H Brassica oleracea
BolC7t45933H Brassica oleracea
BolC9t57069H Brassica oleracea
BolC9t57073H Brassica oleracea
BraA01t01640Z Brassica rapa
BraA02t06244Z Brassica rapa
BraA03t14688Z Brassica rapa
BraA08t34057Z Brassica rapa
BraA10t43084Z Brassica rapa
BraA10t43087Z Brassica rapa
C01p21170 Brassica napus
C02p19620 Brassica napus
C07p54480 Brassica napus
C08p09570 Brassica napus
C09p41820 Brassica napus
C09p41860 Brassica napus
CAN.G1130.8 Capsicum annuum
CAN.G236.12 Capsicum annuum
CANSAT11G0803 Cannabis sativa
CANSAT25G0066 Cannabis sativa
CANSAT64G0139 Cannabis sativa
CANSAT64G2117 Cannabis sativa
CARHR233050 Cardamine hirsuta
CARHR265460 Cardamine hirsuta
CARHR265470 Cardamine hirsuta
Carub.0007s1535 Capsella rubella
Carub.0008s1258 Capsella rubella
Carub.0008s1262 Capsella rubella
Ca_03286_v3 Cicer arietinum L.
CBR_g21227 Chara braunii
Cc02_g02560 Coffea canephora
CDE05G3541 Ceratophyllum demersum
CDE11G0032 Ceratophyllum demersum
Cfa022701 Carpinus fangiana
Ciclev10032221m.g Citrus clementina
CiPaw.01G083100 Carya illinoinensis
CiPaw.03G202300 Carya illinoinensis
CiPaw.11G082500 Carya illinoinensis
ClCG05G008250 Citrullus lanatus
COL.COLO4_25342 Corchorus olitorius
COL.COLO4_28022 Corchorus olitorius
Cpa.g.sc107.89 Carica papaya
Cre02.g077300 Chlamydomonas reinhardtii
CsaV3_3G017360 Cucumis sativus L.
CsaV3_5G005970 Cucumis sativus L.
CSS0045929 Camellia sinensis var. sinensis
DCAR_010668 Daucus carota
DCAR_014514 Daucus carota
DCAR_024988 Daucus carota
DCAR_032382 Daucus carota
Dinv28401 Davidia involucrata
Dinv35236 Davidia involucrata
Duzib084G0884 Durio zibethinus
Duzib205G0570 Durio zibethinus
ECA232G0108 Erigeron canadensis
ECA233G1830 Erigeron canadensis
ECA247G1157 Erigeron canadensis
EL10Ac3g05445 Beta vulgaris
EL10Ac4g10236 Beta vulgaris
Eucgr.K00288 Eucalyptus grandis
FAN01G2661 Fragaria x ananassa
FAN01G2891 Fragaria x ananassa
FAN03G0920 Fragaria x ananassa
FAN03G2750 Fragaria x ananassa
FAN03G3161 Fragaria x ananassa
FAN06G0148 Fragaria x ananassa
FAN06G0767 Fragaria x ananassa
FAN06G4901 Fragaria x ananassa
FAN10G1316 Fragaria x ananassa
FAN10G3509 Fragaria x ananassa
FvH4_7g05290 Fragaria vesca
FvH4_7g30020 Fragaria vesca
Glyma.04G200700 Glycine max
Glyma.06G164800 Glycine max
Glyma.11G237200 Glycine max
Glyma.18G020000 Glycine max
Gohir.A08G098400 Gossypium hirsutum
Gohir.A09G042300 Gossypium hirsutum
Gohir.A11G011500 Gossypium hirsutum
Gohir.D08G110000 Gossypium hirsutum
Gohir.D09G043254 Gossypium hirsutum
Gohir.D11G010700 Gossypium hirsutum
Gorai.004G117600 Gossypium raimondii
Gorai.006G050000 Gossypium raimondii
Gorai.007G012200 Gossypium raimondii
GSVIVG01028887001 Vitis vinifera
HanXRQChr01g0002581 Helianthus annuus
HanXRQChr05g0136111 Helianthus annuus
HanXRQChr09g0252461 Helianthus annuus
HanXRQChr13g0396291 Helianthus annuus
HanXRQChr15g0494051 Helianthus annuus
Haze_00029 Corylus avellana
Haze_08147 Corylus avellana
Haze_27273 Corylus avellana
Hma1.2p1_0327F.1_g126270 Hydrangea macrophylla
HPP92_002410 Vanilla planifolia
HPP92_002436 Vanilla planifolia
HPP92_012994 Vanilla planifolia
Hund04777 Selenicereus undatus
Lalb_Chr07g0194231 Lupinus albus
Lalb_Chr12g0209881 Lupinus albus
Lj1C1003T2 Lonicera japonica
Lj2g0020769 Lotus japonicus
Lj5g0027344 Lotus japonicus
Lj8C19T10 Lonicera japonica
LjContig00081g0002839 Lotus japonicus
Lsat_1_v5_gn_8_6881 Lactuca sativa
Lsat_1_v5_gn_9_122340 Lactuca sativa
Lsat_1_v5_gn_9_57541 Lactuca sativa
Manes.06G151200 Manihot esculenta
Manes.14G023700 Manihot esculenta
Mapoly0026s0084 Marchantia polymorpha
MBI18_g02830_MAGBIO Magnolia biondii
MCO11G058 Micromonas commoda
MD01G1206000 Malus domestica
MD03G1250500 Malus domestica
MD07G1276800 Malus domestica
MD11G1270700 Malus domestica
Medtr1g114000 Medicago truncatula
Medtr6g047580 Medicago truncatula
Medtr8g030490 Medicago truncatula
MELO3C005360.2 Cucumis melo
MELO3C006945.2 Cucumis melo
MELO3C026066.2 Cucumis melo
Migut.D02486 Erythranthe guttata
Migut.F00314 Erythranthe guttata
Migut.F01095 Erythranthe guttata
MSTRG.78 Avicennia marina
Nitab4.5_0000084g0290 Nicotiana tabacum
Nitab4.5_0001702g0120 Nicotiana tabacum
Nitab4.5_0003779g0150 Nicotiana tabacum
Nitab4.5_0008467g0030 Nicotiana tabacum
Nn1g01573 Nelumbo nucifera
Nn6g33368 Nelumbo nucifera
Oeu004111.1 Olea europaea
Oeu004112.1 Olea europaea
Oeu048744.1 Olea europaea
Os02g0821800 Oryza sativa ssp. japonica
Os05g0176000 Oryza sativa ssp. japonica
Peaxi162Scf00057g00322 Petunia axillaris
Peaxi162Scf00848g00023 Petunia axillaris
PGR042G2966 Punica granatum
PGSC0003DMG400004308 Solanum tuberosum
PGSC0003DMG400010119 Solanum tuberosum
PGSC0003DMG400020916 Solanum tuberosum
PGSC0003DMG400030132 Solanum tuberosum
Phvul.001G057200 Phaseolus vulgaris
Phvul.009G161800 Phaseolus vulgaris
Potri.008G192700 Populus trichocarpa
Potri.012G144800 Populus trichocarpa
Potri.015G147500 Populus trichocarpa
Pp3c16_12410 Physcomitrium patens
Pp3c16_1450 Physcomitrium patens
Pp3c27_4160 Physcomitrium patens
Pp3c5_11200 Physcomitrium patens
Pp3c6_12420 Physcomitrium patens
Pp3c6_15350 Physcomitrium patens
PRCOL_00005272 Prasinoderma coloniale
Prupe.8G059700 Prunus persica
Prupe.8G117100 Prunus persica
Psat0s3656g0080 Pisum sativum
Psat1g101240 Pisum sativum
PSO017G0277 Papaver somniferum
PSO017G3010 Papaver somniferum
PSO063G1624 Papaver somniferum
PSO063G7529 Papaver somniferum
PSO675G1574 Papaver somniferum
PSO675G7394 Papaver somniferum
PSO782G1333 Papaver somniferum
PSO824G0002 Papaver somniferum
PSO824G0009 Papaver somniferum
PSO824G0017 Papaver somniferum
PSO824G0096 Papaver somniferum
PSO832G4419 Papaver somniferum
QL05p039960 Quercus lobata
QL09p013235 Quercus lobata
QL09p013282 Quercus lobata
QL12p038120 Quercus lobata
RcHm_v2.0_Chr1g0377981 Rosa chinensis
RcHm_v2.0_Chr2g0166961 Rosa chinensis
Rhsim03G0189800 Rhododendron simsii
Rhsim09G0199600 Rhododendron simsii
Sabra08G0146200 Salix brachista
Sabra16G0321200 Salix brachista
Sabra16G0321400 Salix brachista
Sc19g0001380 Simmondsia chinensis
Sc25g0000600 Simmondsia chinensis
Sed0005806 Sechium edule
Sed0008349 Sechium edule
SGA_v2.0_scaffold10G05307 Striga asiatica
SGA_v2.0_scaffold113G31694 Striga asiatica
SMO116G0099 Selaginella moellendorffii
Solyc03g025270.3 Solanum lycopersicum
Sopen03g004100 Solanum pennellii
Sopen04g018080 Solanum pennellii
Sp6g14680 Schrenkiella parvula
Sp7g23660 Schrenkiella parvula
TAR375G0954 Trochodendron aralioides
TAR629G0135 Trochodendron aralioides
TAR636G1281 Trochodendron aralioides
THA.LOC104800263 Tarenaya hassleriana
THA.LOC104811968 Tarenaya hassleriana
THA.LOC104825107 Tarenaya hassleriana
Thecc.03G182100 Theobroma cacao
Thhalv10015376m.g Eutrema salsugineum
Thhalv10015801m.g Eutrema salsugineum
Thhalv10016049m.g Eutrema salsugineum
Thhalv10025746m.g Eutrema salsugineum
TPR.G11426 Trifolium pratense
TPR.G12471 Trifolium pratense
TPR.G20919 Trifolium pratense
TPR.G2432 Trifolium pratense
TPR.G2435 Trifolium pratense
TPR.G31927 Trifolium pratense
TPR.G35341 Trifolium pratense
TPR.G39872 Trifolium pratense
TPR.G4070 Trifolium pratense
TPR.G9882 Trifolium pratense
TWI23G0887 Tripterygium wilfordii
TWI39G0120 Tripterygium wilfordii
vmacro06641 Vaccinium macrocarpon
vmacro17578 Vaccinium macrocarpon
VMungo0647G1654 Vigna mungo
VMungo1309G0443 Vigna mungo
Zm00001eb021280 Zea mays
Zm00001eb188940 Zea mays
Zm00001eb191090 Zea mays
Zm00001eb204720 Zea mays
Zm00001eb216560 Zea mays
Zm00001eb225270 Zea mays
Zm00001eb244660 Zea mays

User provided reference genes

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