Gene: Pp3c27_4160
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c27_4160
- Transcript Identifier Pp3c27_4160V3.1
- Gene Type Coding gene
- Location Chr27 : 2330106-2331056 : positive
Gene Family Information
- ID HOM05D002456
- #Genes/#Species 277/96
- Phylogenetic origin
- ID ORTHO05D002994
- #Genes/#Species 250/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c27_4160V3.1
- pacid 32952416
- alias Phypa_75588
- alias Pp1s54_67V6
- alias Phpat.027G018100
- uniprot A0A2K1IAM7
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001510 | ISO | PLAZA Integrative Orthology | RNA methylation | AT4G25630 |
| GO:0000494 | IBA | GOA Database | box C/D RNA 3'-end processing | |
| GO:0031167 | IBA | GOA Database | rRNA methylation | |
| GO:1990258 | IBA | GOA Database | histone glutamine methylation | |
| GO:0032259 | IEA | GOA Database | methylation | |
| GO:0006364 | IEA | GOA Database | rRNA processing | |
| GO:0006364 | IEA | InterPro | rRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004540 | ISO | PLAZA Integrative Orthology | ribonuclease activity | AT4G25630 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G25630 |
| GO:0008649 | IBA | GOA Database | rRNA methyltransferase activity | |
| GO:0003723 | IBA IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:1990259 | IBA | GOA Database | histone-glutamine methyltransferase activity | |
| GO:0008168 | IEA | GOA Database | methyltransferase activity | |
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031428 | IBA | GOA Database | box C/D RNP complex | |
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT4G25630 |
| GO:0005730 | IBA | GOA Database | nucleolus | |
| GO:0032040 | IBA | GOA Database | small-subunit processome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.1.2.1.5.1 | Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.methyltransferase component Nop1/fibrillarin |