Gene: PGSC0003DMG400030132
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400030132
- Transcript Identifier PGSC0003DMT400077477
- Gene Type Coding gene
- Location ST4.03ch12 : 44629403-44630589 : positive
Gene Family Information
- ID HOM05D002456
- #Genes/#Species 277/96
- Phylogenetic origin
- ID ORTHO05D002994
- #Genes/#Species 250/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37447395
- id PGSC0003DMG400030132.v4.03
- uniprot M1CYH1
Descriptions
- Description Fibrillarin homolog
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001510 | ISO | PLAZA Integrative Orthology | RNA methylation | AT4G25630 |
| GO:0000494 | IBA | GOA Database | box C/D RNA 3'-end processing | |
| GO:0031167 | IBA | GOA Database | rRNA methylation | |
| GO:1990258 | IBA | GOA Database | histone glutamine methylation | |
| GO:0006364 | IEA | GOA Database | rRNA processing | |
| GO:0006364 | IEA | InterPro | rRNA processing | |
| GO:0032259 | IEA | GOA Database | methylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004540 | ISO | PLAZA Integrative Orthology | ribonuclease activity | AT4G25630 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G25630 |
| GO:0008649 | IBA | GOA Database | rRNA methyltransferase activity | |
| GO:0003723 | IBA IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:1990259 | IBA | GOA Database | histone-glutamine methyltransferase activity | |
| GO:0008168 | IEA | GOA Database | methyltransferase activity | |
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032040 | IBA | GOA Database | small-subunit processome | |
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT4G25630 |
| GO:0005730 | IBA | GOA Database | nucleolus | |
| GO:0031428 | IBA | GOA Database | box C/D RNP complex | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |