Gene: PGSC0003DMG400010119

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400010119
  • Transcript Identifier PGSC0003DMT400026234
  • Gene Type Coding gene
  • Location ST4.03ch03 : 43661832-43664672 : positive

Gene Family Information

  • ID HOM05D002456
  • #Genes/#Species 277/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37460348
  • id PGSC0003DMG400010119.v4.03
  • uniprot M1AMW1

Descriptions

  • Description Fibrillarin homolog
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001510
ISO
PLAZA Integrative OrthologyRNA methylation AT4G25630
GO:1990258
IBA
GOA Databasehistone glutamine methylation
GO:0031167
IBA
GOA DatabaserRNA methylation
GO:0000494
IBA
GOA Databasebox C/D RNA 3'-end processing
GO:0032259
IEA
GOA Databasemethylation
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008649
IBA
GOA DatabaserRNA methyltransferase activity
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity AT4G25630
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G25630
GO:1990259
IBA
GOA Databasehistone-glutamine methyltransferase activity
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT4G25630
GO:0032040
IBA
GOA Databasesmall-subunit processome
GO:0031428
IBA
GOA Databasebox C/D RNP complex
GO:0005730
IBA
GOA Databasenucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR000692 Fibrillarin
Mapman id Description
17.1.1.2.1.5.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.methyltransferase component Nop1/fibrillarin