Gene: COL.COLO4_28022

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_28022
  • Transcript Identifier COL.rna26745
  • Gene Type Coding gene
  • Location AWUE01019732.1 : 2861-6364 : negative

Gene Family Information

  • ID HOM05D002456
  • #Genes/#Species 277/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna26745
  • GenBank OMO71807.1
  • id gene27994
  • gene_name COLO4_28022
  • uniprot A0A1R3HN06

Descriptions

  • Description Fibrillarin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0032259
IEA
GOA Databasemethylation
GO:0001510
ISO
PLAZA Integrative OrthologyRNA methylation AT4G25630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G25630
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity AT4G25630

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016592
ISO
PLAZA Integrative Orthologymediator complex AT4G25630
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G25630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000692 Fibrillarin
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Mapman id Description
17.1.1.2.1.5.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.methyltransferase component Nop1/fibrillarin