Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41690 Brassica napus
A03p46990 Brassica napus
A09p13560 Brassica napus
A10p29400 Brassica napus
Aa31LG11G2010 Aethionema arabicum
Aa31LG3G18750 Aethionema arabicum
Aa31LG5G10990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3292 Anthoceros agrestis
Actinidia04873 Actinidia chinensis
Actinidia05910 Actinidia chinensis
Actinidia30887 Actinidia chinensis
Actinidia35008 Actinidia chinensis
Actinidia37614 Actinidia chinensis
Ah.02g113680 Amaranthus hybridus
Ah.12g062600 Amaranthus hybridus
AL2G11870 Arabidopsis lyrata
AL2G11920 Arabidopsis lyrata
AL2G11950 Arabidopsis lyrata
AL3G10280 Arabidopsis lyrata
AL8G38080 Arabidopsis lyrata
Aqoxy3G01501 Aquilegia oxysepala
Aqoxy3G03465 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0GG7BD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BV4TL7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7CGDJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q5YJQ9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SWM3ME Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZZYW0T Arachis hypogaea
AT1G63290 Arabidopsis thaliana
AT3G01850 Arabidopsis thaliana
AT5G61410 Arabidopsis thaliana
ATR0561G092 Amborella trichopoda
ATR1120G124 Amborella trichopoda
Atru.chr6.2534 Acer truncatum
Atru.chr9.179 Acer truncatum
AUR62008442 Chenopodium quinoa
AUR62018151 Chenopodium quinoa
AUR62021648 Chenopodium quinoa
AUR62042564 Chenopodium quinoa
BcaB02g08607 Brassica carinata
BcaB07g29823 Brassica carinata
BcaB08g35694 Brassica carinata
BcaC03g18094 Brassica carinata
BcaC04g22707 Brassica carinata
BcaC06g32412 Brassica carinata
BcaC06g32499 Brassica carinata
BcaC06g33244 Brassica carinata
BcaC06g33246 Brassica carinata
BolC2t12217H Brassica oleracea
BolC7t45026H Brassica oleracea
BraA03t13823Z Brassica rapa
BraA10t44984Z Brassica rapa
C02p36540 Brassica napus
C02p61620 Brassica napus
C07p45030 Brassica napus
C09p16070 Brassica napus
C09p69780 Brassica napus
CAN.G1207.6 Capsicum annuum
CAN.G1231.2 Capsicum annuum
CAN.G479.69 Capsicum annuum
CANSAT64G1027 Cannabis sativa
CANSAT80G1309 Cannabis sativa
CARHR048130 Cardamine hirsuta
CARHR075080 Cardamine hirsuta
CARHR275170 Cardamine hirsuta
Carub.0002s0154 Capsella rubella
Carub.0008s2208 Capsella rubella
Ca_02257_v3 Cicer arietinum L.
Ca_21811_v3 Cicer arietinum L.
CBR_g32434 Chara braunii
CBR_g3855 Chara braunii
Cc00_g29730 Coffea canephora
Cc00_g30800 Coffea canephora
Cc04_g15130 Coffea canephora
CDE02G2761 Ceratophyllum demersum
CDE02G3947 Ceratophyllum demersum
CDE09G0980 Ceratophyllum demersum
Cfa018918 Carpinus fangiana
Ciclev10016576m.g Citrus clementina
Ciclev10021564m.g Citrus clementina
CiPaw.04G035300 Carya illinoinensis
CiPaw.11G046800 Carya illinoinensis
ClCG04G012110 Citrullus lanatus
ClCG11G007010 Citrullus lanatus
COL.COLO4_17170 Corchorus olitorius
Cpa.g.sc111.26 Carica papaya
Cpa.g.sc171.31 Carica papaya
Cre02.g116450 Chlamydomonas reinhardtii
Cre12.g511900 Chlamydomonas reinhardtii
CsaV3_1G005660 Cucumis sativus L.
CsaV3_2G034200 Cucumis sativus L.
CSS0002529 Camellia sinensis var. sinensis
CSS0013884 Camellia sinensis var. sinensis
CSS0016834 Camellia sinensis var. sinensis
CSS0027332 Camellia sinensis var. sinensis
CSS0047408 Camellia sinensis var. sinensis
DCAR_016573 Daucus carota
DCAR_021771 Daucus carota
DCAR_021774 Daucus carota
Dinv10650 Davidia involucrata
Dinv25670 Davidia involucrata
Dinv33352 Davidia involucrata
Dinv38738 Davidia involucrata
Duzib068G1160 Durio zibethinus
Duzib084G1435 Durio zibethinus
Duzib147G0482 Durio zibethinus
Duzib187G0529 Durio zibethinus
ECA232G1712 Erigeron canadensis
ECA246G4213 Erigeron canadensis
ECA247G3852 Erigeron canadensis
EL10Ac2g03081 Beta vulgaris
EL10Ac5g11050 Beta vulgaris
Eucgr.B00532 Eucalyptus grandis
Eucgr.I01657 Eucalyptus grandis
Eucgr.K02489 Eucalyptus grandis
FAN02G0458 Fragaria x ananassa
FAN05G5252 Fragaria x ananassa
FAN08G3426 Fragaria x ananassa
FAN09G4710 Fragaria x ananassa
FAN13G2216 Fragaria x ananassa
FAN14G0887 Fragaria x ananassa
FAN14G3745 Fragaria x ananassa
FAN18G0552 Fragaria x ananassa
FvH4_5g14630 Fragaria vesca
FvH4_6g53180 Fragaria vesca
FvH4_6g53340 Fragaria vesca
Glyma.05G025300 Glycine max
Glyma.16G059000 Glycine max
Glyma.17G101700 Glycine max
Glyma.19G088400 Glycine max
Gohir.A07G064400 Gossypium hirsutum
Gohir.A07G226900 Gossypium hirsutum
Gohir.A10G159500 Gossypium hirsutum
Gohir.A12G178700 Gossypium hirsutum
Gohir.D07G069200 Gossypium hirsutum
Gohir.D07G234100 Gossypium hirsutum
Gohir.D10G084500 Gossypium hirsutum
Gohir.D12G181300 Gossypium hirsutum
Gorai.001G072700 Gossypium raimondii
Gorai.001G269600 Gossypium raimondii
Gorai.008G194500 Gossypium raimondii
Gorai.011G091900 Gossypium raimondii
GSVIVG01001810001 Vitis vinifera
GSVIVG01007976001 Vitis vinifera
HanXRQChr01g0003571 Helianthus annuus
HanXRQChr01g0007981 Helianthus annuus
HanXRQChr02g0043141 Helianthus annuus
HanXRQChr06g0179181 Helianthus annuus
HanXRQChr08g0236701 Helianthus annuus
HanXRQChr09g0256131 Helianthus annuus
HanXRQChr10g0294971 Helianthus annuus
Haze_07300 Corylus avellana
Haze_14855 Corylus avellana
Haze_26206 Corylus avellana
Haze_26749 Corylus avellana
Hma1.2p1_0049F.1_g028350 Hydrangea macrophylla
Hma1.2p1_0322F.1_g125080 Hydrangea macrophylla
Hma1.2p1_1278F.1_g272430 Hydrangea macrophylla
HPP92_003198 Vanilla planifolia
Hund02631 Selenicereus undatus
Hund03352 Selenicereus undatus
Lalb_Chr12g0196941 Lupinus albus
Lalb_Chr13g0303101 Lupinus albus
Lalb_Chr14g0363251 Lupinus albus
Lalb_Chr24g0403361 Lupinus albus
Lj1g0004245 Lotus japonicus
Lj4g0007478 Lotus japonicus
Lj7A608T48 Lonicera japonica
Lj9A466T75 Lonicera japonica
Lju41A51T48 Lonicera japonica
Lju41C51T14 Lonicera japonica
Lsat_1_v5_gn_1_14260 Lactuca sativa
Lsat_1_v5_gn_5_21561 Lactuca sativa
Lsat_1_v5_gn_7_5841 Lactuca sativa
Manes.06G090100 Manihot esculenta
Manes.14G081000 Manihot esculenta
Manes.15G159200 Manihot esculenta
Manes.17G104200 Manihot esculenta
Mapoly0016s0134 Marchantia polymorpha
Mapoly0209s0004 Marchantia polymorpha
MBI02_g20486_MAGBIO Magnolia biondii
MBI11_g07446_MAGBIO Magnolia biondii
MCO07G630 Micromonas commoda
MCO09G233 Micromonas commoda
MCO11G321 Micromonas commoda
MD06G1196800 Malus domestica
MD09G1013300 Malus domestica
MD14G1203700 Malus domestica
MD17G1014000 Malus domestica
Medtr0937s0020 Medicago truncatula
Medtr3g449340 Medicago truncatula
Medtr4g089175 Medicago truncatula
Medtr4g108800 Medicago truncatula
Medtr7g029630 Medicago truncatula
MELO3C001998.2 Cucumis melo
MELO3C008202.2 Cucumis melo
Migut.I00206 Erythranthe guttata
Migut.K01454 Erythranthe guttata
MSTRG.23005 Avicennia marina
MSTRG.3084 Avicennia marina
MSTRG.3263 Avicennia marina
Nitab4.5_0000703g0040 Nicotiana tabacum
Nitab4.5_0001211g0310 Nicotiana tabacum
Nitab4.5_0004485g0060 Nicotiana tabacum
Nitab4.5_0005900g0120 Nicotiana tabacum
Nn3g17307 Nelumbo nucifera
Nn4g22362 Nelumbo nucifera
Nn4g23250 Nelumbo nucifera
Oeu013646.2 Olea europaea
Oeu052448.1 Olea europaea
Os03g0169100 Oryza sativa ssp. japonica
Os09g0505700 Oryza sativa ssp. japonica
Peaxi162Scf00274g00342 Petunia axillaris
Peaxi162Scf00541g00613 Petunia axillaris
PGR083G1762 Punica granatum
PGR142G0429 Punica granatum
PGSC0003DMG400019521 Solanum tuberosum
PGSC0003DMG400023059 Solanum tuberosum
Phvul.001G095400 Phaseolus vulgaris
Phvul.003G188800 Phaseolus vulgaris
Potri.001G332700 Populus trichocarpa
Potri.015G062100 Populus trichocarpa
Pp3c11_3710 Physcomitrium patens
Pp3c18_13640 Physcomitrium patens
Pp3c1_8270 Physcomitrium patens
Pp3c7_23810 Physcomitrium patens
Pp3s30_31 Physcomitrium patens
PRCOL_00000587 Prasinoderma coloniale
PRCOL_00001251 Prasinoderma coloniale
PRCOL_00006965 Prasinoderma coloniale
Prupe.3G303800 Prunus persica
Prupe.5G197000 Prunus persica
Psat3g176560 Pisum sativum
Psat4g049960 Pisum sativum
PSO017G6202 Papaver somniferum
PSO063G4970 Papaver somniferum
PSO170G1634 Papaver somniferum
PSO170G2498 Papaver somniferum
PSO478G3476 Papaver somniferum
PSO832G2074 Papaver somniferum
QL02p071808 Quercus lobata
QL10p017560 Quercus lobata
RcHm_v2.0_Chr2g0175221 Rosa chinensis
RcHm_v2.0_Chr7g0181861 Rosa chinensis
Rhsim08G0152500 Rhododendron simsii
Rhsim10G0007500 Rhododendron simsii
Sabra15G0087200 Salix brachista
Sabra16G0213500 Salix brachista
SalBow4G1208 Salvia bowleyana
SalBow4G2075 Salvia bowleyana
SalBow5G3171 Salvia bowleyana
Sc04g0002840 Simmondsia chinensis
Sc09g0003450 Simmondsia chinensis
Sed0004149 Sechium edule
Sed0004299 Sechium edule
Sed0022071 Sechium edule
SEGI_08302 Sequoiadendron giganteum
SEGI_14315 Sequoiadendron giganteum
SEGI_18658 Sequoiadendron giganteum
SEGI_25101 Sequoiadendron giganteum
SEGI_35316 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07199 Striga asiatica
SGA_v2.0_scaffold25G10930 Striga asiatica
SGA_v2.0_scaffold44G16906 Striga asiatica
SHI03903 Sapria himalayana
SHI10771 Sapria himalayana
SMO172G0181 Selaginella moellendorffii
SMO358G0518 Selaginella moellendorffii
Solyc03g115820.3 Solanum lycopersicum
Solyc05g007260.3 Solanum lycopersicum
Sopen03g034800 Solanum pennellii
Sopen05g003220 Solanum pennellii
Sp2g01240 Schrenkiella parvula
Sp2g24610 Schrenkiella parvula
TAR133G0005 Trochodendron aralioides
TAR374G0843 Trochodendron aralioides
TAR622G1156 Trochodendron aralioides
TAR629G1214 Trochodendron aralioides
THA.LOC104801478 Tarenaya hassleriana
THA.LOC104819103 Tarenaya hassleriana
THA.LOC104819409 Tarenaya hassleriana
Thecc.03G093200 Theobroma cacao
Thecc.04G033500 Theobroma cacao
Thhalv10004743m.g Eutrema salsugineum
Thhalv10014361m.g Eutrema salsugineum
Thhalv10023677m.g Eutrema salsugineum
TPR.G38298 Trifolium pratense
TPR.G39334 Trifolium pratense
TWI15G0439 Tripterygium wilfordii
TWI36G0847 Tripterygium wilfordii
TWI60G1545 Tripterygium wilfordii
unitig_750.g28507 Utricularia gibba
unitig_8.g4492 Utricularia gibba
vmacro05946 Vaccinium macrocarpon
vmacro17566 Vaccinium macrocarpon
VMungo1215G1016 Vigna mungo
VMungo1383G3614 Vigna mungo
Zm00001eb005330 Zea mays
Zm00001eb317710 Zea mays
Zm00001eb402390 Zea mays

User provided reference genes

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