Gene: SGA_v2.0_scaffold25G10930

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold25G10930
  • Transcript Identifier SGA_v2.0_scaffold25T10930
  • Gene Type Coding gene
  • Location scaffold25 : 1138423-1141532 : positive

Gene Family Information

  • ID HOM05D002248
  • #Genes/#Species 300/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Ribulose-phosphate 3-epimerase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006098
IEA
InterPropentose-phosphate shunt
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G61410
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT5G61410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016857
IEA
InterProracemase and epimerase activity, acting on carbohydrates and derivatives
GO:0003824
IEA
InterProcatalytic activity
GO:0004750
IEA
InterProribulose-phosphate 3-epimerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G61410
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G61410
GO:0010319
ISO
PLAZA Integrative Orthologystromule AT5G61410
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G61410
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G61410
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G61410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000056 Ribulose-phosphate 3-epimerase-like
IPR013785 Aldolase-type TIM barrel
IPR011060 Ribulose-phosphate binding barrel
IPR026019 Ribulose-phosphate 3-epimerase
Mapman id Description
1.2.10 Photosynthesis.calvin cycle.phosphopentose epimerase