Gene: COL.COLO4_17170

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_17170
  • Transcript Identifier COL.rna15934
  • Gene Type Coding gene
  • Location AWUE01016309.1 : 28010-29950 : negative

Gene Family Information

  • ID HOM05D002248
  • #Genes/#Species 300/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna15934
  • GenBank OMO92981.1
  • id gene17142
  • gene_name COLO4_17170
  • uniprot A0A1R3JDT7

Descriptions

  • Description Ribulose-phosphate 3-epimerase-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT5G61410
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G61410
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006098
IEA
GOA Databasepentose-phosphate shunt
GO:0006098
IEA
InterPropentose-phosphate shunt

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016857
IEA
GOA Databaseracemase and epimerase activity, acting on carbohydrates and derivatives
GO:0016857
IEA
InterProracemase and epimerase activity, acting on carbohydrates and derivatives
GO:0004750
IEA
GOA Databaseribulose-phosphate 3-epimerase activity
GO:0004750
IEA
InterProribulose-phosphate 3-epimerase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G61410
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G63290
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G63290
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G61410
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G61410
GO:0010319
ISO
PLAZA Integrative Orthologystromule AT5G61410
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G61410
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G61410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR026019 Ribulose-phosphate 3-epimerase
IPR011060 Ribulose-phosphate binding barrel
IPR000056 Ribulose-phosphate 3-epimerase-like
Mapman id Description
3.9.2.2 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribulose-phosphate 3-epimerase