Gene: Sopen05g003220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g003220
  • Transcript Identifier Sopen05g003220.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 2129595-2132709 : negative

Gene Family Information

  • ID HOM05D002248
  • #Genes/#Species 300/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g003220.1

Descriptions

  • Description Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) - Oryza sativa (Rice), Aldolase-type TIM barrel family protein | FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity | INVOLVED IN: carbohydrate metabolic process, metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel , Ribulose-phosphate 3-epimerase , Ribulose-phosphate binding barrel | BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006098
IEA
InterPropentose-phosphate shunt

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0016857
IEA
InterProracemase and epimerase activity, acting on carbohydrates and derivatives
GO:0004750
IEA
InterProribulose-phosphate 3-epimerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G63290
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G63290

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011060 Ribulose-phosphate binding barrel
IPR013785 Aldolase-type TIM barrel
IPR000056 Ribulose-phosphate 3-epimerase-like
IPR026019 Ribulose-phosphate 3-epimerase
Mapman id Description
3.9.2.2 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribulose-phosphate 3-epimerase