Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p30580 Brassica napus
A07p32520 Brassica napus
Aa31LG1G17940 Aethionema arabicum
Aa31LG3G3040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4377 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1967 Anthoceros agrestis
Actinidia06606 Actinidia chinensis
Actinidia20062 Actinidia chinensis
Actinidia23644 Actinidia chinensis
Ah.04g160310 Amaranthus hybridus
Ah.06g190900 Amaranthus hybridus
AL2G26100 Arabidopsis lyrata
AL8G41220 Arabidopsis lyrata
Aqoxy2G03049 Aquilegia oxysepala
Aqoxy2G03070 Aquilegia oxysepala
Aqoxy2G03871 Aquilegia oxysepala
Aqoxy5G02298 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7D624Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9F49MR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BG9WT0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SAM4NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SRPF4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UY60S3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7WSHY Arachis hypogaea
AT1G67500 Arabidopsis thaliana
AT5G63960 Arabidopsis thaliana
ATR0584G016 Amborella trichopoda
ATR0706G256 Amborella trichopoda
Atru.chr1.2931 Acer truncatum
Atru.chr2.372 Acer truncatum
Atru.chr4.962 Acer truncatum
AUR62000499 Chenopodium quinoa
AUR62000811 Chenopodium quinoa
AUR62005157 Chenopodium quinoa
AUR62006845 Chenopodium quinoa
BcaB03g15362 Brassica carinata
BcaC01g02650 Brassica carinata
BcaC01g02652 Brassica carinata
BolC3t18498H Brassica oleracea
BolC6t38955H Brassica oleracea
BraA06t26010Z Brassica rapa
BraA07t30876Z Brassica rapa
C03p62380 Brassica napus
C06p38660 Brassica napus
CAN.G1034.31 Capsicum annuum
CAN.G128.115 Capsicum annuum
CAN.G350.31 Capsicum annuum
CANSAT01G2904 Cannabis sativa
CANSAT54G3017 Cannabis sativa
CARHR060080 Cardamine hirsuta
CARHR182070 Cardamine hirsuta
CARHR182080 Cardamine hirsuta
CARHR277870 Cardamine hirsuta
Carub.0002s1383 Capsella rubella
Carub.0008s2474 Capsella rubella
Ca_05812_v3 Cicer arietinum L.
Ca_16976_v3 Cicer arietinum L.
CBR_g26314 Chara braunii
CBR_g26315 Chara braunii
CBR_g38906 Chara braunii
Cc02_g33310 Coffea canephora
Cc07_g18900 Coffea canephora
CDE06G1389 Ceratophyllum demersum
Cfa002919 Carpinus fangiana
Cfa024282 Carpinus fangiana
Cfa025827 Carpinus fangiana
Ciclev10000086m.g Citrus clementina
Ciclev10003639m.g Citrus clementina
CiPaw.03G119300 Carya illinoinensis
CiPaw.07G018700 Carya illinoinensis
ClCG01G015100 Citrullus lanatus
ClCG02G015610 Citrullus lanatus
COL.COLO4_09630 Corchorus olitorius
COL.COLO4_13444 Corchorus olitorius
Cpa.g.sc12.184 Carica papaya
Cpa.g.sc42.179 Carica papaya
Cpa.g.sc42.181 Carica papaya
Cpa.g.sc42.182 Carica papaya
Cpa.g.sc48.65 Carica papaya
Cpa.g.sc48.66 Carica papaya
Cpa.g.sc48.67 Carica papaya
Cpa.g.sc48.68 Carica papaya
Cre01.g015250 Chlamydomonas reinhardtii
Cre03.g198750 Chlamydomonas reinhardtii
Cre09.g387400 Chlamydomonas reinhardtii
CsaV3_2G006490 Cucumis sativus L.
CsaV3_6G041210 Cucumis sativus L.
CSS0006817 Camellia sinensis var. sinensis
CSS0012384 Camellia sinensis var. sinensis
CSS0020069 Camellia sinensis var. sinensis
CSS0020764 Camellia sinensis var. sinensis
CSS0023852 Camellia sinensis var. sinensis
DCAR_001197 Daucus carota
DCAR_001198 Daucus carota
DCAR_001814 Daucus carota
Dinv20510 Davidia involucrata
Dinv20532 Davidia involucrata
Dinv34360 Davidia involucrata
Dinv40301 Davidia involucrata
Duzib268G1329 Durio zibethinus
ECA233G2868 Erigeron canadensis
ECA236G3568 Erigeron canadensis
EL10Ac4g09368 Beta vulgaris
EL10Ac4g09369 Beta vulgaris
EL10Ac4g09604 Beta vulgaris
Eucgr.B01945 Eucalyptus grandis
Eucgr.B01951 Eucalyptus grandis
Eucgr.I00173 Eucalyptus grandis
FAN02G0878 Fragaria x ananassa
FAN05G0625 Fragaria x ananassa
FAN09G2733 Fragaria x ananassa
FAN14G2713 Fragaria x ananassa
FAN19G2450 Fragaria x ananassa
FAN23G2639 Fragaria x ananassa
FAN26G3211 Fragaria x ananassa
FAN28G0184 Fragaria x ananassa
FvH4_1g24660 Fragaria vesca
FvH4_6g06120 Fragaria vesca
Glyma.03G237200 Glycine max
Glyma.04G210700 Glycine max
Glyma.06G155300 Glycine max
Gohir.A08G210100 Gossypium hirsutum
Gohir.A13G139100 Gossypium hirsutum
Gohir.D08G227001 Gossypium hirsutum
Gohir.D13G143900 Gossypium hirsutum
Gorai.004G241000 Gossypium raimondii
Gorai.013G160900 Gossypium raimondii
GSVIVG01000087001 Vitis vinifera
GSVIVG01026455001 Vitis vinifera
HanXRQChr12g0380541 Helianthus annuus
HanXRQChr15g0469941 Helianthus annuus
Haze_04184 Corylus avellana
Haze_25289 Corylus avellana
Haze_26645 Corylus avellana
Haze_26679 Corylus avellana
Hma1.2p1_1077F.1_g254700 Hydrangea macrophylla
HPP92_001324 Vanilla planifolia
HPP92_005659 Vanilla planifolia
Hund07076 Selenicereus undatus
Hund07251 Selenicereus undatus
Lalb_Chr18g0045671 Lupinus albus
Lalb_Chr23g0272641 Lupinus albus
Lj1g0002975 Lotus japonicus
Lj1g0026508 Lotus japonicus
Lj2A610T30 Lonicera japonica
Lj2C610T1 Lonicera japonica
Lj2C610T3 Lonicera japonica
Lj6g0003801 Lotus japonicus
Lj9A88T63 Lonicera japonica
Lj9A93T20 Lonicera japonica
Lj9C88G10 Lonicera japonica
Lj9C89G5 Lonicera japonica
LjContig00564g0014639 Lotus japonicus
Lju1040C0G1 Lonicera japonica
Lju1225A0T4 Lonicera japonica
Lju1225A1G38 Lonicera japonica
Lju1225A2T63 Lonicera japonica
Lju1225A2T64 Lonicera japonica
Lsat_1_v5_gn_5_68921 Lactuca sativa
Lsat_1_v5_gn_9_86800 Lactuca sativa
Manes.09G167800 Manihot esculenta
Manes.12G077400 Manihot esculenta
Mapoly0082s0049 Marchantia polymorpha
Mapoly0087s0021 Marchantia polymorpha
MBI03_g39989_MAGBIO Magnolia biondii
MBI10_g26754_MAGBIO Magnolia biondii
MBI15_g24375_MAGBIO Magnolia biondii
MCO05G447 Micromonas commoda
MCO12G390 Micromonas commoda
MD00G1053300 Malus domestica
MD05G1053400 Malus domestica
MD05G1053600 Malus domestica
MD05G1053700 Malus domestica
MD05G1053800 Malus domestica
MD05G1053900 Malus domestica
MD05G1054000 Malus domestica
MD07G1029900 Malus domestica
MD12G1217900 Malus domestica
MD15G1136200 Malus domestica
Medtr3g096525 Medicago truncatula
Medtr7g113380 Medicago truncatula
MELO3C004237.2 Cucumis melo
MELO3C024596.2 Cucumis melo
MELO3C033130.2 Cucumis melo
Migut.B00967 Erythranthe guttata
Migut.B01032 Erythranthe guttata
Migut.E01506 Erythranthe guttata
Migut.H00864 Erythranthe guttata
Migut.N02062 Erythranthe guttata
Migut.N02070 Erythranthe guttata
MSTRG.23471 Avicennia marina
MSTRG.27991 Avicennia marina
Nitab4.5_0000062g0470 Nicotiana tabacum
Nitab4.5_0000062g0490 Nicotiana tabacum
Nitab4.5_0000062g0530 Nicotiana tabacum
Nitab4.5_0000062g0540 Nicotiana tabacum
Nitab4.5_0000137g0070 Nicotiana tabacum
Nitab4.5_0003156g0080 Nicotiana tabacum
Nitab4.5_0003690g0040 Nicotiana tabacum
Nitab4.5_0003690g0050 Nicotiana tabacum
Nitab4.5_0003690g0060 Nicotiana tabacum
Nn033s41620 Nelumbo nucifera
Nn3g21358 Nelumbo nucifera
Nn5g28479 Nelumbo nucifera
Oeu002661.1 Olea europaea
Oeu037837.1 Olea europaea
Oeu058301.1 Olea europaea
Os07g0669000 Oryza sativa ssp. japonica
Os11g0186400 Oryza sativa ssp. japonica
Peaxi162Scf00037g00637 Petunia axillaris
Peaxi162Scf00153g00816 Petunia axillaris
Phvul.005G019000 Phaseolus vulgaris
Phvul.006G091300 Phaseolus vulgaris
Phvul.009G155200 Phaseolus vulgaris
Phvul.011G029100 Phaseolus vulgaris
Potri.005G065800 Populus trichocarpa
Potri.013G022200 Populus trichocarpa
Pp3c10_11570 Physcomitrium patens
Pp3c10_25280 Physcomitrium patens
Pp3c11_13900 Physcomitrium patens
Pp3c11_14490 Physcomitrium patens
Pp3c13_14630 Physcomitrium patens
Pp3c13_14690 Physcomitrium patens
Pp3c14_3970 Physcomitrium patens
Pp3c14_3980 Physcomitrium patens
Pp3c15_13700 Physcomitrium patens
Pp3c15_13750 Physcomitrium patens
Pp3c16_12570 Physcomitrium patens
Pp3c16_17860 Physcomitrium patens
Pp3c16_6050 Physcomitrium patens
Pp3c17_18800 Physcomitrium patens
Pp3c1_290 Physcomitrium patens
Pp3c25_2990 Physcomitrium patens
Pp3c27_3350 Physcomitrium patens
Pp3c2_18826 Physcomitrium patens
Pp3c2_29370 Physcomitrium patens
Pp3c2_33440 Physcomitrium patens
Pp3c2_390 Physcomitrium patens
Pp3c3_18830 Physcomitrium patens
Pp3c4_24900 Physcomitrium patens
Pp3c6_15720 Physcomitrium patens
Pp3c6_19160 Physcomitrium patens
Pp3c9_12701 Physcomitrium patens
Pp3c9_3410 Physcomitrium patens
PRCOL_00002177 Prasinoderma coloniale
PRCOL_00003841 Prasinoderma coloniale
Prupe.1G328900 Prunus persica
Prupe.4G273600 Prunus persica
Prupe.4G277100 Prunus persica
Prupe.6G025200 Prunus persica
Prupe.6G324000 Prunus persica
Psat0s2197g0080 Pisum sativum
Psat0s2197g0160 Pisum sativum
Psat3g068200 Pisum sativum
Psat5g060760 Pisum sativum
PSO017G4864 Papaver somniferum
PSO170G1195 Papaver somniferum
PSO170G4442 Papaver somniferum
PSO210G3028 Papaver somniferum
QL03p007353 Quercus lobata
QL03p007751 Quercus lobata
QL03p054396 Quercus lobata
QL10p042354 Quercus lobata
RcHm_v2.0_Chr2g0122111 Rosa chinensis
RcHm_v2.0_Chr3g0455131 Rosa chinensis
Rhsim06G0107300 Rhododendron simsii
Rhsim06G0107400 Rhododendron simsii
Rhsim06G0107500 Rhododendron simsii
Rhsim07G0183800 Rhododendron simsii
Rhsim07G0183900 Rhododendron simsii
Rhsim07G0184000 Rhododendron simsii
Rhsim08G0103800 Rhododendron simsii
Rhsim10G0131800 Rhododendron simsii
Rhsim12G0060600 Rhododendron simsii
Sabra04G0085200 Salix brachista
Sabra05G0054400 Salix brachista
Sabra13G0024400 Salix brachista
Sabra15G0077100 Salix brachista
Sc09g0003130 Simmondsia chinensis
Sc16g0009480 Simmondsia chinensis
Sed0001711 Sechium edule
Sed0004291 Sechium edule
SEGI_14345 Sequoiadendron giganteum
SEGI_14509 Sequoiadendron giganteum
SEGI_27212 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10361 Striga asiatica
SGA_v2.0_scaffold273G46462 Striga asiatica
SGA_v2.0_scaffold80G25788 Striga asiatica
SHI11495 Sapria himalayana
SHI11497 Sapria himalayana
SHI18128 Sapria himalayana
SHI18133 Sapria himalayana
SHI18137 Sapria himalayana
SHI18138 Sapria himalayana
SHI18139 Sapria himalayana
SMO146G0384 Selaginella moellendorffii
SMO228G0093 Selaginella moellendorffii
SMO232G0005 Selaginella moellendorffii
SMO232G0095 Selaginella moellendorffii
SMO232G0106 Selaginella moellendorffii
Solyc01g099220.3 Solanum lycopersicum
Solyc10g081250.3 Solanum lycopersicum
Sopen01g042770 Solanum pennellii
Sopen10g031750 Solanum pennellii
Sp2g27020 Schrenkiella parvula
Sp5g22500 Schrenkiella parvula
TAR376G0128 Trochodendron aralioides
TAR628G1205 Trochodendron aralioides
TAR633G0909 Trochodendron aralioides
THA.LOC104818425 Tarenaya hassleriana
THA.LOC104823729 Tarenaya hassleriana
Thecc.05G301300 Theobroma cacao
Thecc.07G044100 Theobroma cacao
Thhalv10003565m.g Eutrema salsugineum
Thhalv10017996m.g Eutrema salsugineum
TPR.G11128 Trifolium pratense
TPR.G28192 Trifolium pratense
TPR.G33207 Trifolium pratense
TPR.G36235 Trifolium pratense
TWI31G0245 Tripterygium wilfordii
TWI36G1702 Tripterygium wilfordii
unitig_0.g2310 Utricularia gibba
unitig_0.g2311 Utricularia gibba
vmacro04830 Vaccinium macrocarpon
vmacro04986 Vaccinium macrocarpon
vmacro12782 Vaccinium macrocarpon
VMungo0540G0763 Vigna mungo
VMungo1309G0642 Vigna mungo
Zm00001eb201340 Zea mays
Zm00001eb330170 Zea mays

User provided reference genes

Program Settings