Gene: Os11g0186400
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os11g0186400
- Transcript Identifier Os11t0186400-00
- Gene Type Coding gene
- Location chr11 : 4387835-4397761 : negative
Gene Family Information
- ID HOM05D002009
- #Genes/#Species 330/97
- Phylogenetic origin
- ID ORTHO05D005728
- #Genes/#Species 153/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os11t0186400-00
- MSU-ID LOC_Os11g08330.1
- uniprot Q9LRE6
Descriptions
- Description Similar to DNA polymerase delta catalytic subunit (EC 2.7.7.7).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0045004 | IBA | GOA Database | DNA replication proofreading | |
GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT1G67500 |
GO:0006974 | ISO | PLAZA Integrative Orthology | cellular response to DNA damage stimulus | AT1G67500 |
GO:0009411 | ISO | PLAZA Integrative Orthology | response to UV | AT1G67500 |
GO:0071494 | ISO | PLAZA Integrative Orthology | cellular response to UV-C | AT1G67500 |
GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G67500 |
GO:0006297 | IBA | GOA Database | nucleotide-excision repair, DNA gap filling | |
GO:0006287 | IBA | GOA Database | base-excision repair, gap-filling | |
GO:0006261 | IBA | GOA Database | DNA-dependent DNA replication | |
GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
GO:0006260 | IEA | GOA Database | DNA replication | |
GO:0071897 | IEA | GOA Database | DNA biosynthetic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003677 | IEA | GOA Database | DNA binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0003887 | IBA IEA | GOA Database | DNA-directed DNA polymerase activity | |
GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
GO:0003676 | IEA | GOA Database | nucleic acid binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0000166 | IEA | InterPro | nucleotide binding | |
GO:0008296 | IBA | GOA Database | 3'-5'-exodeoxyribonuclease activity | |
GO:0016740 | IEA | GOA Database | transferase activity | |
GO:0004518 | IEA | GOA Database | nuclease activity | |
GO:0004527 | IEA | GOA Database | exonuclease activity | |
GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding | |
GO:0051539 | IEA | GOA Database | 4 iron, 4 sulfur cluster binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0043625 | IBA | GOA Database | delta DNA polymerase complex | |
GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR012337 | Ribonuclease H-like superfamily |
IPR006133 | DNA-directed DNA polymerase, family B, exonuclease domain |
IPR006172 | DNA-directed DNA polymerase, family B |
IPR025687 | C4-type zinc-finger of DNA polymerase delta |
IPR042087 | DNA polymerase family B, thumb domain |
IPR006134 | DNA-directed DNA polymerase, family B, multifunctional domain |
IPR036397 | Ribonuclease H superfamily |
IPR023211 | DNA polymerase, palm domain superfamily |
IPR043502 | DNA/RNA polymerase superfamily |
Mapman id | Description |
---|---|
13.2.3.2.1 | Cell cycle organisation.DNA replication.elongation.DNA polymerase delta complex.component POLD1 |