Gene: Pp3c13_14690
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c13_14690
- Transcript Identifier Pp3c13_14690V3.1
- Gene Type Coding gene
- Location Chr13 : 10790106-10791652 : negative
Gene Family Information
- ID HOM05D002009
- #Genes/#Species 330/97
- Phylogenetic origin
- ID ORTHO05D005728
- #Genes/#Species 153/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c13_14690V3.1
- pacid 32930096
- uniprot A0A2K1JLZ5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006297 | IBA | GOA Database | nucleotide-excision repair, DNA gap filling | |
| GO:0006287 | IBA | GOA Database | base-excision repair, gap-filling | |
| GO:0006261 | IBA | GOA Database | DNA-dependent DNA replication | |
| GO:0045004 | IBA | GOA Database | DNA replication proofreading | |
| GO:0071897 | IEA | GOA Database | DNA biosynthetic process | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008296 | IBA | GOA Database | 3'-5'-exodeoxyribonuclease activity | |
| GO:0003887 | IBA IEA | GOA Database | DNA-directed DNA polymerase activity | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043625 | IBA | GOA Database | delta DNA polymerase complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036397 | Ribonuclease H superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR006172 | DNA-directed DNA polymerase, family B |
| IPR023211 | DNA polymerase, palm domain superfamily |
| IPR042087 | DNA polymerase family B, thumb domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR006134 | DNA-directed DNA polymerase, family B, multifunctional domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |