Gene: Sopen10g031750

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g031750
  • Transcript Identifier Sopen10g031750.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 79231829-79252695 : positive

Gene Family Information

  • ID HOM05D002009
  • #Genes/#Species 330/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g031750.1

Descriptions

  • Description DNA polymerase delta catalytic subunit (EC 2.7.7.7) - Oryza sativa (Rice), EMBRYO DEFECTIVE 2780 (EMB2780) | FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: DNA replication, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | CONTAINS InterPro DOMAIN/s: DNA polymerase, family B , DNA-directed DNA polymerase, family B, exonuclease domain , DNA-directed DNA polymerase, family B, conserved region , Polynucleotidyl transferase, ribonuclease H fold , DNA-directed DNA polymerase, family B, conserved site , DNA-directed DNA polymerase, family B , DNA-directed DNA polymerase, family B, pol2 | BEST Arabidopsis thaliana protein match is: recovery protein 3 ., DNA-directed DNA polymerase, family B, multifunctional domain
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003677
IEA
InterProDNA binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043502 DNA/RNA polymerase superfamily
IPR023211 DNA polymerase, palm domain superfamily
IPR025687 C4-type zinc-finger of DNA polymerase delta
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR042087 DNA polymerase family B, thumb domain
IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain
IPR006172 DNA-directed DNA polymerase, family B
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
Mapman id Description
13.2.3.2.1 Cell cycle organisation.DNA replication.elongation.DNA polymerase delta complex.component POLD1