Gene: Solyc01g099220.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g099220.3
  • Transcript Identifier Solyc01g099220.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 81777471-81791484 : positive

Gene Family Information

  • ID HOM05D002009
  • #Genes/#Species 330/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g099220.3.1
  • uniprot A0A3Q7ENA7
  • gene_id Solyc01g099220

Descriptions

  • Description DNA polymerase (AHRD V3.3 *** A0A2G3AW20_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT1G67500
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT1G67500
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT1G67500
GO:0071494
ISO
PLAZA Integrative Orthologycellular response to UV-C AT1G67500
GO:0000724
IBA
GOA Databasedouble-strand break repair via homologous recombination
GO:0042276
IBA
GOA Databaseerror-prone translesion synthesis
GO:0019985
IEA
GOA Databasetranslesion synthesis
GO:0019985
IEA
InterProtranslesion synthesis
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IBA
GOA Database3'-5' exonuclease activity
GO:0003887
IBA
IEA
GOA DatabaseDNA-directed DNA polymerase activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0016035
IBA
IEA
GOA Databasezeta DNA polymerase complex
GO:0016035
IEA
InterProzeta DNA polymerase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
IPR006172 DNA-directed DNA polymerase, family B
IPR036397 Ribonuclease H superfamily
IPR025687 C4-type zinc-finger of DNA polymerase delta
IPR042087 DNA polymerase family B, thumb domain
IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain
IPR043502 DNA/RNA polymerase superfamily
IPR023211 DNA polymerase, palm domain superfamily
IPR030559 DNA polymerase zeta catalytic subunit
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
14.2.6.1 DNA damage response.DNA repair polymerase activities.DNA polymerase zeta heterodimer.catalytic subunit REV3