Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34190 Brassica napus
A03p45400 Brassica napus
A05p00260 Brassica napus
Aa31LG1G29020 Aethionema arabicum
Aa31LG5G15830 Aethionema arabicum
Actinidia19777 Actinidia chinensis
Actinidia21053 Actinidia chinensis
Actinidia21498 Actinidia chinensis
Actinidia24344 Actinidia chinensis
Actinidia24828 Actinidia chinensis
Actinidia32221 Actinidia chinensis
Actinidia35557 Actinidia chinensis
Ah.04g161170 Amaranthus hybridus
Ah.08g213100 Amaranthus hybridus
AL3G16160 Arabidopsis lyrata
AL4G47270 Arabidopsis lyrata
AL7G42810 Arabidopsis lyrata
AL7G43470 Arabidopsis lyrata
AL9U10030 Arabidopsis lyrata
AL9U10040 Arabidopsis lyrata
Aqoxy2G02961 Aquilegia oxysepala
Aqoxy5G00748 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5G7CV2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65M59H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9XGC9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AWF533 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3YIB3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XS7LB4 Arachis hypogaea
AT2G15260 Arabidopsis thaliana
AT2G47700 Arabidopsis thaliana
AT3G05545 Arabidopsis thaliana
AT4G13490 Arabidopsis thaliana
ATR0582G131 Amborella trichopoda
ATR0796G022 Amborella trichopoda
ATR0796G137 Amborella trichopoda
Atru.chr2.75 Acer truncatum
Atru.chr5.1156 Acer truncatum
AUR62000756 Chenopodium quinoa
AUR62005212 Chenopodium quinoa
BcaB02g08752 Brassica carinata
BcaB04g19258 Brassica carinata
BcaB04g21442 Brassica carinata
BcaB08g34584 Brassica carinata
BcaC01g03069 Brassica carinata
BcaC02g12548 Brassica carinata
BcaC05g25970 Brassica carinata
BcaC05g30112 Brassica carinata
BcaC05g30158 Brassica carinata
BcaC06g33722 Brassica carinata
BcaC07g40784 Brassica carinata
BcaC09g47839 Brassica carinata
BcaNung06421 Brassica carinata
BolC1t05690H Brassica oleracea
BolC3t16439H Brassica oleracea
BolC3t17924H Brassica oleracea
BolC4t21664H Brassica oleracea
BolC5t30625H Brassica oleracea
BolC5t34826H Brassica oleracea
BolC7t44380H Brassica oleracea
BolC8t51356H Brassica oleracea
BraA01t04476Z Brassica rapa
BraA03t12593Z Brassica rapa
BraA03t13672Z Brassica rapa
BraA05t19023Z Brassica rapa
BraA05t19075Z Brassica rapa
C02p16410 Brassica napus
C03p41580 Brassica napus
C03p56340 Brassica napus
C04p00170 Brassica napus
C05p19250 Brassica napus
C07p38590 Brassica napus
C08p37750 Brassica napus
CANSAT25G1967 Cannabis sativa
CANSAT25G3193 Cannabis sativa
CANSAT54G0146 Cannabis sativa
CARHR079940 Cardamine hirsuta
CARHR143090 Cardamine hirsuta
Carub.0003s0484 Capsella rubella
Carub.0004s3042 Capsella rubella
Carub.0007s2877 Capsella rubella
Carub.0007s2906 Capsella rubella
Carub.0007s2907 Capsella rubella
Ca_05796_v3 Cicer arietinum L.
Ca_10133_v3 Cicer arietinum L.
Cc02_g34200 Coffea canephora
CDE02G0401 Ceratophyllum demersum
CDE02G3296 Ceratophyllum demersum
CDE02G4508 Ceratophyllum demersum
CDE02G4523 Ceratophyllum demersum
CDE06G2813 Ceratophyllum demersum
Cfa005924 Carpinus fangiana
Cfa006634 Carpinus fangiana
Cfa015396 Carpinus fangiana
Ciclev10001227m.g Citrus clementina
Ciclev10006312m.g Citrus clementina
Ciclev10020382m.g Citrus clementina
CiPaw.07G022200 Carya illinoinensis
CiPaw.07G107800 Carya illinoinensis
CiPaw.08G161600 Carya illinoinensis
ClCG03G017310 Citrullus lanatus
COL.COLO4_10527 Corchorus olitorius
COL.COLO4_13852 Corchorus olitorius
COL.COLO4_23356 Corchorus olitorius
COL.COLO4_23755 Corchorus olitorius
Cpa.g.sc327.4 Carica papaya
Cpa.g.sc9.229 Carica papaya
CsaV3_1G038740 Cucumis sativus L.
CSS0018606 Camellia sinensis var. sinensis
CSS0020279 Camellia sinensis var. sinensis
CSS0032431 Camellia sinensis var. sinensis
CSS0039587 Camellia sinensis var. sinensis
CSS0044976 Camellia sinensis var. sinensis
CSS0046081 Camellia sinensis var. sinensis
DCAR_002825 Daucus carota
DCAR_003361 Daucus carota
DCAR_005796 Daucus carota
DCAR_022142 Daucus carota
DCAR_022143 Daucus carota
DCAR_022670 Daucus carota
Dinv30819 Davidia involucrata
Dinv33049 Davidia involucrata
Dinv40334 Davidia involucrata
Dinv44371 Davidia involucrata
Duzib128G0926 Durio zibethinus
Duzib133G0338 Durio zibethinus
Duzib138G0033 Durio zibethinus
Duzib177G1061 Durio zibethinus
Duzib211G0185 Durio zibethinus
ECA236G0210 Erigeron canadensis
ECA236G3557 Erigeron canadensis
EL10Ac4g09908 Beta vulgaris
Eucgr.B01912 Eucalyptus grandis
FAN02G3011 Fragaria x ananassa
FAN05G1277 Fragaria x ananassa
FAN09G2669 Fragaria x ananassa
FAN14G1734 Fragaria x ananassa
FvH4_6g06620 Fragaria vesca
Glyma.03G235100 Glycine max
Glyma.10G151500 Glycine max
Glyma.19G232800 Glycine max
Glyma.20G236700 Glycine max
Gohir.A08G117700 Gossypium hirsutum
Gohir.A11G268300 Gossypium hirsutum
Gohir.A13G109800 Gossypium hirsutum
Gohir.A13G174400 Gossypium hirsutum
Gohir.D08G138700 Gossypium hirsutum
Gohir.D11G278200 Gossypium hirsutum
Gohir.D13G112400 Gossypium hirsutum
Gohir.D13G180200 Gossypium hirsutum
Gorai.004G142300 Gossypium raimondii
Gorai.007G300400 Gossypium raimondii
Gorai.013G126200 Gossypium raimondii
Gorai.013G205600 Gossypium raimondii
GSVIVG01028007001 Vitis vinifera
GSVIVG01031134001 Vitis vinifera
HanXRQChr04g0118031 Helianthus annuus
HanXRQChr05g0136211 Helianthus annuus
HanXRQChr09g0247861 Helianthus annuus
HanXRQChr09g0247871 Helianthus annuus
HanXRQChr09g0247921 Helianthus annuus
HanXRQChr11g0339901 Helianthus annuus
Haze_01189 Corylus avellana
Haze_01190 Corylus avellana
Haze_04134 Corylus avellana
Haze_04921 Corylus avellana
Haze_04925 Corylus avellana
Hma1.2p1_0209F.1_g088440 Hydrangea macrophylla
HPP92_025320 Vanilla planifolia
HPP92_025322 Vanilla planifolia
HPP92_028335 Vanilla planifolia
Hund05420 Selenicereus undatus
Hund07102 Selenicereus undatus
Hund18147 Selenicereus undatus
Hund21714 Selenicereus undatus
Lalb_Chr02g0148101 Lupinus albus
Lalb_Chr06g0167721 Lupinus albus
Lalb_Chr15g0077401 Lupinus albus
Lalb_Chr18g0045791 Lupinus albus
Lalb_Chr21g0310571 Lupinus albus
Lj1A26T29 Lonicera japonica
Lj1g0010414 Lotus japonicus
Lj5A389T59 Lonicera japonica
Lj5A391T59 Lonicera japonica
Lj5A395G43 Lonicera japonica
Lj5A396T57 Lonicera japonica
Lj5C390T4 Lonicera japonica
Lj5C391G14 Lonicera japonica
Lj5C396G7 Lonicera japonica
Lj5g0002371 Lotus japonicus
Lj9C146G5 Lonicera japonica
Lsat_1_v5_gn_4_167661 Lactuca sativa
Lsat_1_v5_gn_7_72040 Lactuca sativa
Lsat_1_v5_gn_8_53500 Lactuca sativa
Manes.03G196300 Manihot esculenta
Manes.08G117000 Manihot esculenta
Manes.09G170900 Manihot esculenta
Mapoly0004s0157 Marchantia polymorpha
Mapoly0065s0060 Marchantia polymorpha
Mapoly0067s0019 Marchantia polymorpha
Mapoly0149s0027 Marchantia polymorpha
MapolyY_A0053 Marchantia polymorpha
MapolyY_B0002 Marchantia polymorpha
MBI07_g11060_MAGBIO Magnolia biondii
MBI11_g22249_MAGBIO Magnolia biondii
MBI11_g35128_MAGBIO Magnolia biondii
MBI19_g13195_MAGBIO Magnolia biondii
MD04G1065100 Malus domestica
MD04G1199600 Malus domestica
MD08G1111000 Malus domestica
MD10G1168300 Malus domestica
MD12G1212400 Malus domestica
MD13G1167400 Malus domestica
MD16G1167800 Malus domestica
MD17G1282000 Malus domestica
Medtr1g083390 Medicago truncatula
Medtr7g112740 Medicago truncatula
MELO3C015298.2 Cucumis melo
Migut.N02088 Erythranthe guttata
MSTRG.16390 Avicennia marina
MSTRG.27977 Avicennia marina
Nitab4.5_0001233g0060 Nicotiana tabacum
Nitab4.5_0001904g0010 Nicotiana tabacum
Nitab4.5_0003844g0010 Nicotiana tabacum
Nitab4.5_0010216g0020 Nicotiana tabacum
Nn3g21468 Nelumbo nucifera
Nn4g25807 Nelumbo nucifera
Oeu010920.1 Olea europaea
Oeu043342.1 Olea europaea
Oeu043739.1 Olea europaea
Oeu045900.1 Olea europaea
Oeu045901.1 Olea europaea
Os01g0350900 Oryza sativa ssp. japonica
Os05g0154600 Oryza sativa ssp. japonica
Os08g0539300 Oryza sativa ssp. japonica
Os09g0511500 Oryza sativa ssp. japonica
Peaxi162Scf00037g01221 Petunia axillaris
Peaxi162Scf00071g00544 Petunia axillaris
PGR004G2206 Punica granatum
PGR031G0021 Punica granatum
PGR083G1363 Punica granatum
PGSC0003DMG400014085 Solanum tuberosum
PGSC0003DMG400014950 Solanum tuberosum
PGSC0003DMG400020008 Solanum tuberosum
PGSC0003DMG400024717 Solanum tuberosum
PGSC0003DMG400029067 Solanum tuberosum
PGSC0003DMG400038819 Solanum tuberosum
PGSC0003DMG400039920 Solanum tuberosum
PGSC0003DMG400045695 Solanum tuberosum
Phvul.006G089200 Phaseolus vulgaris
Phvul.007G197300 Phaseolus vulgaris
Potri.005G024700 Populus trichocarpa
Potri.013G015600 Populus trichocarpa
Prupe.1G134800 Prunus persica
Prupe.6G320100 Prunus persica
Psat0s1500g0040 Pisum sativum
Psat0s1830g0240 Pisum sativum
PSO170G6103 Papaver somniferum
PSO210G5200 Papaver somniferum
PSO210G6703 Papaver somniferum
PSO832G2288 Papaver somniferum
QL03p020135 Quercus lobata
QL06p009106 Quercus lobata
QL12p027615 Quercus lobata
RcHm_v2.0_Chr3g0455821 Rosa chinensis
Rhsim01G0284400 Rhododendron simsii
Rhsim05G0138600 Rhododendron simsii
Rhsim08G0225900 Rhododendron simsii
Rhsim10G0031900 Rhododendron simsii
Rhsim13G0010900 Rhododendron simsii
Sabra05G0030100 Salix brachista
Sabra13G0013700 Salix brachista
Sabra13G0017800 Salix brachista
Sabra13G0019100 Salix brachista
SalBow1G1061 Salvia bowleyana
Sc06g0004090 Simmondsia chinensis
Sc16g0008800 Simmondsia chinensis
Sed0011984 Sechium edule
Sed0027191 Sechium edule
SEGI_15866 Sequoiadendron giganteum
SEGI_37182 Sequoiadendron giganteum
SGA_v2.0_scaffold586G53057 Striga asiatica
SGA_v2.0_scaffold80G25894 Striga asiatica
SGA_v2.0_scaffold81G26096 Striga asiatica
SMO165G0108 Selaginella moellendorffii
Solyc01g099790.3 Solanum lycopersicum
Sopen01g043310 Solanum pennellii
Sp3g04390 Schrenkiella parvula
Sp3g24870 Schrenkiella parvula
Sp4g29640 Schrenkiella parvula
TAR362G0062 Trochodendron aralioides
TAR362G0861 Trochodendron aralioides
TAR365G1043 Trochodendron aralioides
TAR622G0713 Trochodendron aralioides
TAR622G0837 Trochodendron aralioides
TAR625G0016 Trochodendron aralioides
TAR633G2461 Trochodendron aralioides
TAR636G1732 Trochodendron aralioides
THA.LOC104802795 Tarenaya hassleriana
THA.LOC104805890 Tarenaya hassleriana
THA.LOC104817500 Tarenaya hassleriana
THA.LOC104818723 Tarenaya hassleriana
THA.LOC104821725 Tarenaya hassleriana
Thecc.01G299000 Theobroma cacao
Thecc.04G285900 Theobroma cacao
Thecc.04G286000 Theobroma cacao
Thecc.05G313600 Theobroma cacao
Thhalv10001505m.g Eutrema salsugineum
Thhalv10020788m.g Eutrema salsugineum
Thhalv10023001m.g Eutrema salsugineum
TPR.G17700 Trifolium pratense
TPR.G33183 Trifolium pratense
TWI23G1185 Tripterygium wilfordii
TWI36G1062 Tripterygium wilfordii
TWI56G0125 Tripterygium wilfordii
TWI59G0139 Tripterygium wilfordii
TWI73G0262 Tripterygium wilfordii
TWI77G0209 Tripterygium wilfordii
unitig_0.g2317 Utricularia gibba
unitig_26.g9482 Utricularia gibba
unitig_26.g9483 Utricularia gibba
unitig_52.g17384 Utricularia gibba
vmacro02456 Vaccinium macrocarpon
vmacro15001 Vaccinium macrocarpon
vmacro19742 Vaccinium macrocarpon
vmacro19743 Vaccinium macrocarpon
VMungo0540G0393 Vigna mungo
Zm00001eb037170 Zea mays
Zm00001eb131520 Zea mays
Zm00001eb198260 Zea mays
Zm00001eb282730 Zea mays
Zm00001eb346030 Zea mays

User provided reference genes

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