Gene: SGA_v2.0_scaffold80G25894
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold80G25894
- Transcript Identifier SGA_v2.0_scaffold80T25894
- Gene Type Coding gene
- Location scaffold80 : 1226859-1232130 : negative
Gene Family Information
- ID HOM05D001999
- #Genes/#Species 331/92
- Phylogenetic origin
- ID ORTHO05D001994
- #Genes/#Species 328/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product RING/U-box superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0090227 | ISO | PLAZA Integrative Orthology | regulation of red or far-red light signaling pathway | AT2G47700 |
GO:0010629 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression | AT2G47700 |
GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT2G47700 |
GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT2G47700 |
GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT2G47700 |
GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT2G47700 |
GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT2G47700 |
GO:0016567 | ISO | PLAZA Integrative Orthology | protein ubiquitination | AT3G05545 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G47700 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G47700 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.1.4.3.3.6 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RFI2) |