Gene: PSO210G5200

General Information

Structural Information

  • Species Papaver somniferum
  • Gene Identifier PSO210G5200
  • Transcript Identifier PSO210G5200.02
  • Gene Type Coding gene
  • Location NC_039359.1 : 203548524-203552368 : positive

Gene Family Information

  • ID HOM05D001999
  • #Genes/#Species 331/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_026594394.1
  • pid XP_026450179.1
  • id gene-LOC113350276

Descriptions

  • product E3 ubiquitin-protein ligase RFI2-like, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090227
ISO
PLAZA Integrative Orthologyregulation of red or far-red light signaling pathway AT2G47700
GO:0010629
ISO
PLAZA Integrative Orthologynegative regulation of gene expression AT2G47700
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT2G47700
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT2G47700
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT2G47700
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT2G47700
GO:0010114
ISO
PLAZA Integrative Orthologyresponse to red light AT2G47700
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT3G05545

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G47700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G47700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044274 E3 ubiquitin-protein ligase RFI2
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RFI2)