Gene: AT2G47700

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G47700
  • Transcript Identifier AT2G47700.1
  • Gene Type Coding gene
  • Location Chr2 : 19552506-19554351 : negative

Gene Family Information

  • ID HOM05D001999
  • #Genes/#Species 331/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G47700.1
  • symbol RFI2
  • full_name RED AND FAR-RED INSENSITIVE 2
  • uniprot O82239

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RED AND FAR-RED INSENSITIVE 2 (RFI2); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05545.1); Has 457 Blast hits to 456 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 17; Plants - 198; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010629
IMP
Gene Ontologynegative regulation of gene expression1
GO:0010017
IEA
GOA Databasered or far-red light signaling pathway
GO:0009908
IEA
GOA Databaseflower development
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0048511
IEA
GOA Databaserhythmic process
GO:0007623
IEP
Gene Ontologycircadian rhythm1
GO:2000028
IMP
Gene Ontologyregulation of photoperiodism, flowering2
GO:0090227
IMP
Gene Ontologyregulation of red or far-red light signaling pathway2
GO:0010468
IMP
Gene Ontologyregulation of gene expression2
GO:0010218
IMP
Gene Ontologyresponse to far red light2
GO:0010114
IMP
Gene Ontologyresponse to red light2
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity3
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus2
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR044274 E3 ubiquitin-protein ligase RFI2
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RFI2)