Gene: COL.COLO4_10527
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_10527
- Transcript Identifier COL.rna9322
- Gene Type Coding gene
- Location AWUE01014526.1 : 83393-91320 : positive
Gene Family Information
- ID HOM05D001999
- #Genes/#Species 331/92
- Phylogenetic origin
- ID ORTHO05D001994
- #Genes/#Species 328/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna9322
- GenBank OMP03296.1
- id gene10499
- gene_name COLO4_10527
- uniprot A0A1R3K8B0
Descriptions
- Description Sterol-regulatory element binding proteins intramembrane protease
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006508 | IEA | InterPro | proteolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008233 | IEA | GOA Database | peptidase activity | |
| GO:0004842 | IEA | GOA Database | ubiquitin-protein transferase activity | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0004222 | IEA | GOA Database | metalloendopeptidase activity | |
| GO:0004222 | IEA | InterPro | metalloendopeptidase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.11.1.3 | Protein modification.targeting peptide maturation.endomembrane system.site-2 protease (S2P) |
| 19.2.2.1.4.3.3.6 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RFI2) |
| 27.11.2.2 | Multi-process regulation.UPR (Unfolded Protein Response) signalling.S1P/S2P-bZIP17/28 pathway.transcription factor protease (S2P) |