Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40940 Brassica napus
A02p04840 Brassica napus
A03p08800 Brassica napus
A03p33540 Brassica napus
A05p43170 Brassica napus
A08p12100 Brassica napus
A10p21160 Brassica napus
Aa31LG11G11270 Aethionema arabicum
Aa31LG4G10360 Aethionema arabicum
Aa31LG5G14710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2033 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_304.3 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2444 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3349 Anthoceros agrestis
Actinidia00428 Actinidia chinensis
Actinidia40167 Actinidia chinensis
Ah.01g001660 Amaranthus hybridus
Ah.01g013000 Amaranthus hybridus
AL3G14180 Arabidopsis lyrata
AL6G29610 Arabidopsis lyrata
Aqoxy5G01191 Aquilegia oxysepala
Aqoxy6G01270 Aquilegia oxysepala
AT2G09990 Arabidopsis thaliana
AT3G04230 Arabidopsis thaliana
AT5G18380 Arabidopsis thaliana
ATR0661G571 Amborella trichopoda
ATR0796G206 Amborella trichopoda
ATR0800G016 Amborella trichopoda
Atru.chr2.315 Acer truncatum
Atru.chr4.2518 Acer truncatum
Atru.chr5.2651 Acer truncatum
AUR62008303 Chenopodium quinoa
AUR62024465 Chenopodium quinoa
AUR62026056 Chenopodium quinoa
AUR62031065 Chenopodium quinoa
BcaB01g05189 Brassica carinata
BcaB04g19345 Brassica carinata
BcaB05g23294 Brassica carinata
BcaB08g36682 Brassica carinata
BcaC01g04384 Brassica carinata
BcaC03g13588 Brassica carinata
BcaC05g29957 Brassica carinata
BcaNung04936 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00770 Brassica napus
BolC1t05760H Brassica oleracea
BolC3t13509H Brassica oleracea
BolC3t16342H Brassica oleracea
BolC5t34946H Brassica oleracea
BolC9t58694H Brassica oleracea
BraA01t04530Z Brassica rapa
BraA03t10205Z Brassica rapa
BraA03t12529Z Brassica rapa
BraA05t23059Z Brassica rapa
BraA06t25222Z Brassica rapa
BraA08t33201Z Brassica rapa
BraA10t44179Z Brassica rapa
C02p09820 Brassica napus
C03p10290 Brassica napus
C03p40740 Brassica napus
C05p62910 Brassica napus
C09p58290 Brassica napus
C09p58570 Brassica napus
CAN.G12.29 Capsicum annuum
CAN.G1249.10 Capsicum annuum
CAN.G179.9 Capsicum annuum
CAN.G615.1 Capsicum annuum
CANSAT25G0576 Cannabis sativa
CANSAT78G1096 Cannabis sativa
CARHR078380 Cardamine hirsuta
CARHR194650 Cardamine hirsuta
CARHR194690 Cardamine hirsuta
Carub.0003s0345 Capsella rubella
Carub.0006s1664 Capsella rubella
Carub.0007s2623 Capsella rubella
Ca_04175_v3 Cicer arietinum L.
Ca_04176_v3 Cicer arietinum L.
Ca_17246_v3 Cicer arietinum L.
Ca_17247_v3 Cicer arietinum L.
Ca_18708_v3 Cicer arietinum L.
Ca_18709_v3 Cicer arietinum L.
CBR_g38159 Chara braunii
Cc02_g18980 Coffea canephora
CDE01G0344 Ceratophyllum demersum
CDE02G0830 Ceratophyllum demersum
CDE02G3885 Ceratophyllum demersum
CDE04G1413 Ceratophyllum demersum
Cfa004544 Carpinus fangiana
Cfa015611 Carpinus fangiana
Ciclev10006162m.g Citrus clementina
Ciclev10029508m.g Citrus clementina
CiPaw.01G163000 Carya illinoinensis
CiPaw.02G094800 Carya illinoinensis
CiPaw.05G008200 Carya illinoinensis
ClCG02G006030 Citrullus lanatus
ClCG05G009810 Citrullus lanatus
ClCG05G010150 Citrullus lanatus
COL.COLO4_06201 Corchorus olitorius
COL.COLO4_22730 Corchorus olitorius
COL.COLO4_28372 Corchorus olitorius
COL.COLO4_32632 Corchorus olitorius
COL.COLO4_36532 Corchorus olitorius
Cpa.g.sc51.50 Carica papaya
Cpa.g.sc710.1 Carica papaya
Cre13.g573351 Chlamydomonas reinhardtii
CsaV3_3G018380 Cucumis sativus L.
CsaV3_3G018990 Cucumis sativus L.
CsaV3_7G008490 Cucumis sativus L.
CSS0004997 Camellia sinensis var. sinensis
CSS0023732 Camellia sinensis var. sinensis
CSS0036716 Camellia sinensis var. sinensis
CSS0037117 Camellia sinensis var. sinensis
CSS0042742 Camellia sinensis var. sinensis
DCAR_002396 Daucus carota
Dinv15734 Davidia involucrata
Dinv38417 Davidia involucrata
Duzib052G0177 Durio zibethinus
Duzib132G0718 Durio zibethinus
Duzib132G0872 Durio zibethinus
Duzib248G1466 Durio zibethinus
ECA236G2499 Erigeron canadensis
ECA240G2759 Erigeron canadensis
EL10Ac1g01392 Beta vulgaris
EL10Ac2g04259 Beta vulgaris
EL10Ac3g06414 Beta vulgaris
EL10Ac9g22589 Beta vulgaris
Eucgr.G01416 Eucalyptus grandis
Eucgr.I01133 Eucalyptus grandis
FAN07G0923 Fragaria x ananassa
FAN12G3353 Fragaria x ananassa
FAN15G1496 Fragaria x ananassa
FAN17G0659 Fragaria x ananassa
FAN17G1924 Fragaria x ananassa
FAN17G2440 Fragaria x ananassa
FAN20G2838 Fragaria x ananassa
FAN22G0467 Fragaria x ananassa
FAN24G1538 Fragaria x ananassa
FAN27G2456 Fragaria x ananassa
FvH4_2g05750 Fragaria vesca
Glyma.02G103600 Glycine max
Glyma.05G241200 Glycine max
Glyma.07G214900 Glycine max
Glyma.08G048200 Glycine max
Gohir.A01G007300 Gossypium hirsutum
Gohir.A03G188100 Gossypium hirsutum
Gohir.A04G120100 Gossypium hirsutum
Gohir.A13G041800 Gossypium hirsutum
Gohir.D01G007400 Gossypium hirsutum
Gohir.D02G208900 Gossypium hirsutum
Gohir.D04G161700 Gossypium hirsutum
Gohir.D13G040500 Gossypium hirsutum
Gorai.002G008400 Gossypium raimondii
Gorai.005G236900 Gossypium raimondii
Gorai.012G149700 Gossypium raimondii
Gorai.013G045400 Gossypium raimondii
GSVIVG01009942001 Vitis vinifera
GSVIVG01017923001 Vitis vinifera
GSVIVG01031714001 Vitis vinifera
HanXRQChr04g0128141 Helianthus annuus
HanXRQChr05g0163131 Helianthus annuus
HanXRQChr09g0250441 Helianthus annuus
HanXRQChr16g0514981 Helianthus annuus
Haze_00931 Corylus avellana
Haze_10111 Corylus avellana
Haze_27640 Corylus avellana
Hma1.2p1_0370F.1_g137610 Hydrangea macrophylla
Hma1.2p1_0511F.1_g168930 Hydrangea macrophylla
Hma1.2p1_0995F.1_g245660 Hydrangea macrophylla
HPP92_010813 Vanilla planifolia
HPP92_017043 Vanilla planifolia
Lalb_Chr05g0219291 Lupinus albus
Lalb_Chr07g0189821 Lupinus albus
Lalb_Chr09g0328421 Lupinus albus
Lalb_Chr12g0208231 Lupinus albus
Lalb_Chr16g0384841 Lupinus albus
Lj4g0000859 Lotus japonicus
Lj4g0013436 Lotus japonicus
Lj4P374T31 Lonicera japonica
Lj5P211T29 Lonicera japonica
Lj6P597T68 Lonicera japonica
Lj8P338T16 Lonicera japonica
Lsat_1_v5_gn_0_4221 Lactuca sativa
Lsat_1_v5_gn_4_67861 Lactuca sativa
Lsat_1_v5_gn_5_112140 Lactuca sativa
Lsat_1_v5_gn_9_110921 Lactuca sativa
Manes.07G028600 Manihot esculenta
Manes.07G075500 Manihot esculenta
Manes.10G078700 Manihot esculenta
Manes.10G109900 Manihot esculenta
Mapoly0036s0018 Marchantia polymorpha
Mapoly0179s0010 Marchantia polymorpha
MBI16_g22653_MAGBIO Magnolia biondii
MBI18_g28071_MAGBIO Magnolia biondii
MCO09G812 Micromonas commoda
MD00G1143000 Malus domestica
MD05G1084000 Malus domestica
MD08G1187300 Malus domestica
MD13G1187300 Malus domestica
MD16G1188000 Malus domestica
Medtr4g085580 Medicago truncatula
Medtr5g075240 Medicago truncatula
Medtr8g106020 Medicago truncatula
Medtr8g106080 Medicago truncatula
MELO3C018459.2 Cucumis melo
MELO3C019490.2 Cucumis melo
MELO3C019524.2 Cucumis melo
Migut.B00365 Erythranthe guttata
Migut.N01181 Erythranthe guttata
MSTRG.12753 Avicennia marina
MSTRG.17971 Avicennia marina
MSTRG.27734 Avicennia marina
MSTRG.5357 Avicennia marina
Nitab4.5_0000034g0210 Nicotiana tabacum
Nitab4.5_0000113g0070 Nicotiana tabacum
Nitab4.5_0000113g0080 Nicotiana tabacum
Nitab4.5_0001412g0040 Nicotiana tabacum
Nitab4.5_0001888g0020 Nicotiana tabacum
Nitab4.5_0002103g0030 Nicotiana tabacum
Nitab4.5_0002579g0010 Nicotiana tabacum
Nitab4.5_0014099g0010 Nicotiana tabacum
Nn1g04793 Nelumbo nucifera
Nn2g15775 Nelumbo nucifera
Nn4g24681 Nelumbo nucifera
Nn4g26254 Nelumbo nucifera
Nn5g30350 Nelumbo nucifera
Nn8g38514 Nelumbo nucifera
Oeu001771.1 Olea europaea
Oeu007298.1 Olea europaea
Oeu010382.1 Olea europaea
Oeu013725.1 Olea europaea
Oeu021081.1 Olea europaea
Oeu044303.1 Olea europaea
Os11g0127900 Oryza sativa ssp. japonica
Os12g0124200 Oryza sativa ssp. japonica
Peaxi162Scf00071g00918 Petunia axillaris
Peaxi162Scf00393g00021 Petunia axillaris
PGR042G1690 Punica granatum
PGR142G4334 Punica granatum
PGSC0003DMG400004124 Solanum tuberosum
PGSC0003DMG400030052 Solanum tuberosum
Phvul.002G324300 Phaseolus vulgaris
Phvul.003G047800 Phaseolus vulgaris
Potri.001G304700 Populus trichocarpa
Potri.008G150000 Populus trichocarpa
Potri.010G091000 Populus trichocarpa
Pp3c18_1350 Physcomitrium patens
Pp3c19_22410 Physcomitrium patens
Pp3c21_20630 Physcomitrium patens
Pp3c22_21090 Physcomitrium patens
Pp3c9_4180 Physcomitrium patens
PRCOL_00000297 Prasinoderma coloniale
Prupe.1G154800 Prunus persica
Prupe.8G128300 Prunus persica
Psat1g005240 Pisum sativum
Psat7g004360 Pisum sativum
Psat7g126320 Pisum sativum
PSO170G1524 Papaver somniferum
PSO170G5990 Papaver somniferum
PSO210G7435 Papaver somniferum
PSO302G0044 Papaver somniferum
PSO339G2007 Papaver somniferum
PSO541G3553 Papaver somniferum
PSO675G8526 Papaver somniferum
QL06p003503 Quercus lobata
QL11p034896 Quercus lobata
RcHm_v2.0_Chr2g0126911 Rosa chinensis
RcHm_v2.0_Chr3g0469551 Rosa chinensis
RcHm_v2.0_Chr4g0416971 Rosa chinensis
RcHm_v2.0_Chr6g0255201 Rosa chinensis
RcHm_v2.0_Chr7g0205351 Rosa chinensis
Rhsim04G0204500 Rhododendron simsii
Rhsim11G0164500 Rhododendron simsii
Sabra03G0157300 Salix brachista
Sabra10G0052400 Salix brachista
Sabra16G0191200 Salix brachista
SalBow5G2680 Salvia bowleyana
SalBow6G1472 Salvia bowleyana
Sc13g0004190 Simmondsia chinensis
Sc19g0004330 Simmondsia chinensis
Sc25g0004440 Simmondsia chinensis
Sed0003119 Sechium edule
Sed0004398 Sechium edule
Sed0013652 Sechium edule
Sed0016597 Sechium edule
Sed0018563 Sechium edule
SEGI_36990 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06601 Striga asiatica
SGA_v2.0_scaffold32G13052 Striga asiatica
SGA_v2.0_scaffold90G27617 Striga asiatica
SHI24426 Sapria himalayana
SMO069G0005 Selaginella moellendorffii
Solyc01g068530.3 Solanum lycopersicum
Solyc04g026100.1 Solanum lycopersicum
Solyc05g005690.1 Solanum lycopersicum
Sopen01g030490 Solanum pennellii
Sopen02g001400 Solanum pennellii
Sopen04g014030 Solanum pennellii
Sopen05g001690 Solanum pennellii
Sp3g03140 Schrenkiella parvula
Sp6g25940 Schrenkiella parvula
TAR063G0005 Trochodendron aralioides
TAR083G0002 Trochodendron aralioides
TAR365G0425 Trochodendron aralioides
TAR381G1080 Trochodendron aralioides
TAR625G1318 Trochodendron aralioides
TAR633G0133 Trochodendron aralioides
TAR636G2530 Trochodendron aralioides
THA.LOC104802854 Tarenaya hassleriana
THA.LOC104805660 Tarenaya hassleriana
THA.LOC104820749 Tarenaya hassleriana
THA.LOC104822130 Tarenaya hassleriana
THA.LOC104823830 Tarenaya hassleriana
THA.LOC104827279 Tarenaya hassleriana
Thecc.02G103400 Theobroma cacao
Thecc.04G201700 Theobroma cacao
Thecc.04G226800 Theobroma cacao
Thecc.10G124500 Theobroma cacao
Thhalv10014948m.g Eutrema salsugineum
Thhalv10021712m.g Eutrema salsugineum
Thhalv10023899m.g Eutrema salsugineum
TPR.G12633 Trifolium pratense
TPR.G12932 Trifolium pratense
TPR.G29230 Trifolium pratense
TWI09G0483 Tripterygium wilfordii
TWI31G1260 Tripterygium wilfordii
TWI53G1106 Tripterygium wilfordii
TWI73G0457 Tripterygium wilfordii
TWI79G1343 Tripterygium wilfordii
unitig_21.g20738 Utricularia gibba
unitig_744.g24227 Utricularia gibba
VMungo0251G0715 Vigna mungo
Zm00001eb093610 Zea mays
Zm00001eb163700 Zea mays
Zm00001eb405580 Zea mays

User provided reference genes

Program Settings