Gene: Sopen05g001690

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g001690
  • Transcript Identifier Sopen05g001690.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 603257-603700 : negative

Gene Family Information

  • ID HOM05D001989
  • #Genes/#Species 333/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g001690.1

Descriptions

  • Description 40S ribosomal protein S16 - Gossypium hirsutum (Upland cotton), Ribosomal protein S5 domain 2-like superfamily protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, chloroplast, membrane | EXPRESSED IN: guard cell, callus, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: Ribosomal protein S9 , Ribosomal protein S5 domain 2-type fold , Ribosomal protein S9, conserved site , Ribosomal protein S5 domain 2-type fold, subgroup | BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G09990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G09990
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G09990
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G09990
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT2G09990
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G09990
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G09990
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G04230
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G09990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000754 Ribosomal protein S9
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Mapman id Description
17.1.3.1.18 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS16