Gene: Solyc01g068530.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g068530.3
  • Transcript Identifier Solyc01g068530.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 70548755-70549207 : negative

Gene Family Information

  • ID HOM05D001989
  • #Genes/#Species 333/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g068530.3.1
  • uniprot A0A3Q7F0F8
  • gene_id Solyc01g068530

Descriptions

  • Description 40S ribosomal protein S16 (AHRD V3.3 *** A0A2G3DIR8_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000462
IBA
GOA Databasematuration of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G09990
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G09990
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G04230
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G09990
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT2G09990
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G09990
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G09990
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G09990
GO:0015935
IBA
GOA Databasesmall ribosomal subunit
GO:0022627
IBA
GOA Databasecytosolic small ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR000754 Ribosomal protein S9
IPR020568 Ribosomal protein S5 domain 2-type fold
Mapman id Description
17.1.3.1.18 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS16