Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38060 Brassica napus
A03p00320 Brassica napus
A04p29260 Brassica napus
Aa31LG1G23070 Aethionema arabicum
Aa31LG8G3200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2262 Anthoceros agrestis
Actinidia08982 Actinidia chinensis
Actinidia16097 Actinidia chinensis
Actinidia23234 Actinidia chinensis
Ah.01g021450 Amaranthus hybridus
Ah.15g099530 Amaranthus hybridus
AL3G28700 Arabidopsis lyrata
AL4G35230 Arabidopsis lyrata
AL6G10710 Arabidopsis lyrata
AL810U10030 Arabidopsis lyrata
Aqoxy2G00897 Aquilegia oxysepala
Aqoxy4G02555 Aquilegia oxysepala
Aqoxy5G03057 Aquilegia oxysepala
Aqoxy7G01681 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.54A98K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DXI2WM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JX8YLS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZW54SW Arachis hypogaea
AT2G38210 Arabidopsis thaliana
AT2G38230 Arabidopsis thaliana
AT3G16050 Arabidopsis thaliana
AT5G01410 Arabidopsis thaliana
ATR0049G065 Amborella trichopoda
Atru.chr1.3304 Acer truncatum
Atru.chr3.4213 Acer truncatum
Atru.chr8.2244 Acer truncatum
AUR62001640 Chenopodium quinoa
AUR62016458 Chenopodium quinoa
AUR62020137 Chenopodium quinoa
AUR62034422 Chenopodium quinoa
AUR62042932 Chenopodium quinoa
BcaB01g06096 Brassica carinata
BcaB01g06228 Brassica carinata
BcaB04g20878 Brassica carinata
BcaB05g21926 Brassica carinata
BcaB06g29037 Brassica carinata
BcaC02g07486 Brassica carinata
BcaC02g07487 Brassica carinata
BcaC03g13075 Brassica carinata
BcaC07g37759 Brassica carinata
BcaC09g48584 Brassica carinata
BolC1t04789H Brassica oleracea
BolC2t06015H Brassica oleracea
BolC3t12614H Brassica oleracea
BolC4t28154H Brassica oleracea
BolC8t48145H Brassica oleracea
BraA01t03863Z Brassica rapa
BraA02t04688Z Brassica rapa
BraA03t09423Z Brassica rapa
BraA04t18394Z Brassica rapa
C01p48250 Brassica napus
C02p00170 Brassica napus
C03p00480 Brassica napus
C04p66520 Brassica napus
CAN.G394.132 Capsicum annuum
CAN.G438.77 Capsicum annuum
CANSAT54G2696 Cannabis sativa
CANSAT56G4293 Cannabis sativa
CARHR035460 Cardamine hirsuta
CARHR091210 Cardamine hirsuta
CARHR132820 Cardamine hirsuta
CARHR211790 Cardamine hirsuta
Carub.0003s1578 Capsella rubella
Carub.0004s2019 Capsella rubella
Carub.0006s0041 Capsella rubella
Ca_00482_v3 Cicer arietinum L.
Ca_20383_v3 Cicer arietinum L.
CBR_g44531 Chara braunii
Cc01_g14260 Coffea canephora
Cc02_g28570 Coffea canephora
Cc04_g03230 Coffea canephora
CDE02G2245 Ceratophyllum demersum
CDE04G1863 Ceratophyllum demersum
Cfa002080 Carpinus fangiana
Cfa011700 Carpinus fangiana
Cfa024706 Carpinus fangiana
Ciclev10012274m.g Citrus clementina
Ciclev10026152m.g Citrus clementina
Ciclev10026215m.g Citrus clementina
Ciclev10028683m.g Citrus clementina
CiPaw.02G150300 Carya illinoinensis
CiPaw.13G077000 Carya illinoinensis
CiPaw.14G059100 Carya illinoinensis
ClCG02G019530 Citrullus lanatus
ClCG09G002060 Citrullus lanatus
ClCG10G022130 Citrullus lanatus
COL.COLO4_14534 Corchorus olitorius
COL.COLO4_30397 Corchorus olitorius
Cpa.g.c43142 Carica papaya
Cpa.g.sc11.144 Carica papaya
Cpa.g.sc1658.1 Carica papaya
Cre15.g643550 Chlamydomonas reinhardtii
CsaV3_3G033790 Cucumis sativus L.
CsaV3_6G016200 Cucumis sativus L.
CsaV3_7G033260 Cucumis sativus L.
CSS0021937 Camellia sinensis var. sinensis
CSS0024254 Camellia sinensis var. sinensis
CSS0046450 Camellia sinensis var. sinensis
CSS0050161 Camellia sinensis var. sinensis
DCAR_002647 Daucus carota
DCAR_007564 Daucus carota
DCAR_024024 Daucus carota
DCAR_026327 Daucus carota
DCAR_028849 Daucus carota
DCAR_029718 Daucus carota
Dinv01591 Davidia involucrata
Dinv03109 Davidia involucrata
Dinv14432 Davidia involucrata
Dinv23110 Davidia involucrata
Dinv28645 Davidia involucrata
Dinv30501 Davidia involucrata
Duzib106G0203 Durio zibethinus
Duzib128G0194 Durio zibethinus
Duzib160G0199 Durio zibethinus
ECA234G1372 Erigeron canadensis
ECA236G3112 Erigeron canadensis
ECA248G3924 Erigeron canadensis
EL10Ac7g16175 Beta vulgaris
EL10Ac9g22010 Beta vulgaris
EL10Ac9g22012 Beta vulgaris
EL10Ac9g22014 Beta vulgaris
Eucgr.B02251 Eucalyptus grandis
Eucgr.F03024 Eucalyptus grandis
Eucgr.K02981 Eucalyptus grandis
FAN02G0883 Fragaria x ananassa
FAN02G2524 Fragaria x ananassa
FAN02G3327 Fragaria x ananassa
FAN02G3679 Fragaria x ananassa
FAN02G3864 Fragaria x ananassa
FAN05G0224 Fragaria x ananassa
FAN05G5601 Fragaria x ananassa
FAN09G3118 Fragaria x ananassa
FAN09G3777 Fragaria x ananassa
FAN11G3760 Fragaria x ananassa
FAN14G2648 Fragaria x ananassa
FAN14G3474 Fragaria x ananassa
FAN14G5500 Fragaria x ananassa
FAN21G2307 Fragaria x ananassa
FvH4_3g38650 Fragaria vesca
FvH4_6g11420 Fragaria vesca
FvH4_6g31450 Fragaria vesca
Glyma.13G225000 Glycine max
Glyma.15G087200 Glycine max
Gohir.A01G227300 Gossypium hirsutum
Gohir.A04G090300 Gossypium hirsutum
Gohir.A05G130800 Gossypium hirsutum
Gohir.A09G165300 Gossypium hirsutum
Gohir.A10G080400 Gossypium hirsutum
Gohir.D01G217100 Gossypium hirsutum
Gohir.D04G130400 Gossypium hirsutum
Gohir.D05G130200 Gossypium hirsutum
Gohir.D09G160900 Gossypium hirsutum
Gohir.D10G070900 Gossypium hirsutum
Gorai.002G263400 Gossypium raimondii
Gorai.006G182600 Gossypium raimondii
Gorai.009G134000 Gossypium raimondii
Gorai.011G075300 Gossypium raimondii
Gorai.012G114100 Gossypium raimondii
GSVIVG01013061001 Vitis vinifera
GSVIVG01017087001 Vitis vinifera
GSVIVG01024735001 Vitis vinifera
HanXRQChr01g0007121 Helianthus annuus
HanXRQChr09g0272441 Helianthus annuus
HanXRQChr14g0456021 Helianthus annuus
Haze_16399 Corylus avellana
Haze_24332 Corylus avellana
Hma1.2p1_0805F.1_g221270 Hydrangea macrophylla
Hma1.2p1_0962F.1_g241870 Hydrangea macrophylla
Hma1.2p1_1455F.1_g284480 Hydrangea macrophylla
HPP92_018032 Vanilla planifolia
Lalb_Chr01g0012931 Lupinus albus
Lalb_Chr15g0086471 Lupinus albus
Lalb_Chr18g0054921 Lupinus albus
Lalb_Chr20g0117581 Lupinus albus
Lj1A137T51 Lonicera japonica
Lj3A953T57 Lonicera japonica
Lj3g0000032 Lotus japonicus
Lj5C59T16 Lonicera japonica
Lj6g0020527 Lotus japonicus
Lsat_1_v5_gn_4_102220 Lactuca sativa
Lsat_1_v5_gn_5_130361 Lactuca sativa
Lsat_1_v5_gn_5_150381 Lactuca sativa
Lsat_1_v5_gn_8_101401 Lactuca sativa
Manes.01G161100 Manihot esculenta
Manes.04G124800 Manihot esculenta
Manes.09G105200 Manihot esculenta
Manes.11G051100 Manihot esculenta
Mapoly0040s0124 Marchantia polymorpha
MBI04_g19383_MAGBIO Magnolia biondii
MBI05_g34803_MAGBIO Magnolia biondii
MBI05_g36635_MAGBIO Magnolia biondii
MCO09G849 Micromonas commoda
MD03G1069200 Malus domestica
MD03G1069800 Malus domestica
MD04G1153300 Malus domestica
MD06G1111000 Malus domestica
MD09G1211600 Malus domestica
MD11G1073500 Malus domestica
MD16G1213800 Malus domestica
MD17G1193900 Malus domestica
Medtr2g017520 Medicago truncatula
Medtr4g012860 Medicago truncatula
MELO3C009168.2 Cucumis melo
MELO3C024240.2 Cucumis melo
MELO3C025846.2 Cucumis melo
Migut.D01023 Erythranthe guttata
Migut.N00776 Erythranthe guttata
MSTRG.12681 Avicennia marina
MSTRG.17882 Avicennia marina
MSTRG.9462 Avicennia marina
Nitab4.5_0002308g0030 Nicotiana tabacum
Nitab4.5_0010620g0020 Nicotiana tabacum
Nitab4.5_0018389g0010 Nicotiana tabacum
Nn2g11510 Nelumbo nucifera
Nn8g39187 Nelumbo nucifera
Oeu000454.1 Olea europaea
Oeu019865.1 Olea europaea
Oeu029483.1 Olea europaea
Oeu033501.1 Olea europaea
Oeu045539.2 Olea europaea
Oeu063950.2 Olea europaea
Os07g0100200 Oryza sativa ssp. japonica
Os10g0100700 Oryza sativa ssp. japonica
Os10g0191600 Oryza sativa ssp. japonica
Os11g0708500 Oryza sativa ssp. japonica
Peaxi162Scf00015g00410 Petunia axillaris
Peaxi162Scf00540g00037 Petunia axillaris
PGR004G2700 Punica granatum
PGR102G0784 Punica granatum
PGR102G1618 Punica granatum
PGSC0003DMG400005690 Solanum tuberosum
PGSC0003DMG400030359 Solanum tuberosum
PGSC0003DMG402005606 Solanum tuberosum
Phvul.006G171100 Phaseolus vulgaris
Potri.001G182100 Populus trichocarpa
Potri.006G100500 Populus trichocarpa
Potri.016G116400 Populus trichocarpa
Pp3c16_11800 Physcomitrium patens
Pp3c27_4290 Physcomitrium patens
Pp3c5_13160 Physcomitrium patens
Pp3c6_17160 Physcomitrium patens
PRCOL_00000635 Prasinoderma coloniale
Prupe.3G069500 Prunus persica
Prupe.6G216600 Prunus persica
Prupe.6G277500 Prunus persica
Prupe.8G053100 Prunus persica
Psat1g196960 Pisum sativum
Psat7g251160 Pisum sativum
PSO063G2118 Papaver somniferum
PSO339G6186 Papaver somniferum
PSO782G0068 Papaver somniferum
PSO801G0577 Papaver somniferum
QL01p038408 Quercus lobata
QL02p026710 Quercus lobata
QL05p022637 Quercus lobata
QL93p2012_0002 Quercus lobata
RcHm_v2.0_Chr1g0327251 Rosa chinensis
RcHm_v2.0_Chr2g0138251 Rosa chinensis
RcHm_v2.0_Chr3g0463101 Rosa chinensis
RcHm_v2.0_Chr5g0069681 Rosa chinensis
Rhsim01G0236500 Rhododendron simsii
Rhsim08G0222300 Rhododendron simsii
Rhsim13G0069000 Rhododendron simsii
Sabra01G0145400 Salix brachista
Sabra06G0077300 Salix brachista
Sabra16G0112000 Salix brachista
SalBow2G1041 Salvia bowleyana
SalBow2G1130 Salvia bowleyana
Sc06g0005960 Simmondsia chinensis
Sc06g0005970 Simmondsia chinensis
Sc12g0000640 Simmondsia chinensis
Sc12g0000650 Simmondsia chinensis
Sc12g0009350 Simmondsia chinensis
Sc21g0006350 Simmondsia chinensis
Sed0000397 Sechium edule
Sed0004949 Sechium edule
Sed0009363 Sechium edule
Sed0009377 Sechium edule
Sed0014284 Sechium edule
SEGI_23797 Sequoiadendron giganteum
SEGI_36574 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32901 Striga asiatica
SGA_v2.0_scaffold22G09710 Striga asiatica
SGA_v2.0_scaffold4G02002 Striga asiatica
SGA_v2.0_scaffold68G22984 Striga asiatica
SHI19144 Sapria himalayana
SHI23925 Sapria himalayana
SMO117G0027 Selaginella moellendorffii
Solyc03g120090.1 Solanum lycopersicum
Solyc06g081980.1 Solanum lycopersicum
Sopen03g038960 Solanum pennellii
Sopen06g033390 Solanum pennellii
Sp3g14400 Schrenkiella parvula
Sp4g20520 Schrenkiella parvula
Sp5g15190 Schrenkiella parvula
Sp6g40720 Schrenkiella parvula
TAR383G0049 Trochodendron aralioides
TAR383G0326 Trochodendron aralioides
TAR383G0709 Trochodendron aralioides
TAR383G0902 Trochodendron aralioides
TAR383G1038 Trochodendron aralioides
TAR623G1012 Trochodendron aralioides
TAR625G0152 Trochodendron aralioides
TAR633G2170 Trochodendron aralioides
TAR636G1814 Trochodendron aralioides
THA.LOC104810521 Tarenaya hassleriana
THA.LOC104816195 Tarenaya hassleriana
THA.LOC104823297 Tarenaya hassleriana
THA.LOC104827052 Tarenaya hassleriana
Thecc.05G015800 Theobroma cacao
Thecc.06G090100 Theobroma cacao
Thhalv10014179m.g Eutrema salsugineum
Thhalv10017969m.g Eutrema salsugineum
Thhalv10021182m.g Eutrema salsugineum
TPR.G17696 Trifolium pratense
TPR.G4575 Trifolium pratense
TWI12G0265 Tripterygium wilfordii
TWI31G1313 Tripterygium wilfordii
TWI53G0781 Tripterygium wilfordii
TWI77G0427 Tripterygium wilfordii
TWI79G1232 Tripterygium wilfordii
unitig_26.g10214 Utricularia gibba
unitig_26.g10215 Utricularia gibba
unitig_94.g28364 Utricularia gibba
vmacro02957 Vaccinium macrocarpon
vmacro14593 Vaccinium macrocarpon
vmacro18900 Vaccinium macrocarpon
VMungo0540G0155 Vigna mungo
Zm00001eb118250 Zea mays
Zm00001eb298350 Zea mays

User provided reference genes

Program Settings