Gene: Sopen03g038960

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g038960
  • Transcript Identifier Sopen03g038960.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 73182860-73183777 : positive

Gene Family Information

  • ID HOM05D001973
  • #Genes/#Species 335/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g038960.1

Descriptions

  • Description Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation. | pyridoxine biosynthesis 1.2 (PDX1.2) | FUNCTIONS IN: protein heterodimerization activity | INVOLVED IN: pyridoxal phosphate biosynthetic process, metabolic process | LOCATED IN: cytosol | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein , Ribulose-phosphate binding barrel | BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042819
IEA
InterProvitamin B6 biosynthetic process
GO:0042823
IEA
InterPropyridoxal phosphate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G16050
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT3G16050

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G16050

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ
IPR033755 PdxS/SNZ N-terminal domain
IPR013785 Aldolase-type TIM barrel
IPR011060 Ribulose-phosphate binding barrel
Mapman id Description
7.7.1.1 Coenzyme metabolism.pyridoxalphosphate biosynthesis.pyridoxal 5'-phosphate synthase complex.synthase component