Gene: Solyc06g081980.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g081980.1
  • Transcript Identifier Solyc06g081980.1.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 45527437-45528366 : positive

Gene Family Information

  • ID HOM05D001973
  • #Genes/#Species 335/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g081980.1.1
  • uniprot A0A3Q7HXK5
  • gene_id Solyc06g081980

Descriptions

  • Description Pyridoxal 5'-phosphate synthase pdxS subunit (AHRD V3.3 *** U9T0K3_RHIID)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G01410
GO:0010335
ISO
PLAZA Integrative Orthologyresponse to non-ionic osmotic stress AT5G01410
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G01410
GO:0006982
ISO
PLAZA Integrative Orthologyresponse to lipid hydroperoxide AT5G01410
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G01410
GO:0042819
IEA
GOA Databasevitamin B6 biosynthetic process
GO:0042819
IEA
InterProvitamin B6 biosynthetic process
GO:0042538
ISO
PLAZA Integrative Orthologyhyperosmotic salinity response AT5G01410
GO:0015994
ISO
PLAZA Integrative Orthologychlorophyll metabolic process AT5G01410
GO:0008615
IBA
GOA Databasepyridoxine biosynthetic process
GO:0006520
IBA
GOA Databasecellular amino acid metabolic process
GO:0042823
IBA
IEA
GOA Databasepyridoxal phosphate biosynthetic process
GO:0042823
IEA
InterPropyridoxal phosphate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G01410
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT5G01410
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G01410
GO:0016843
IBA
GOA Databaseamine-lyase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0012505
ISO
PLAZA Integrative Orthologyendomembrane system AT5G01410
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G01410
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G38230
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G01410
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G38210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ
IPR011060 Ribulose-phosphate binding barrel
IPR033755 PdxS/SNZ N-terminal domain
IPR013785 Aldolase-type TIM barrel
Mapman id Description
7.7.1.1 Coenzyme metabolism.pyridoxalphosphate biosynthesis.pyridoxal 5'-phosphate synthase complex.synthase component