Gene: AT5G01410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G01410
  • Transcript Identifier AT5G01410.2
  • Gene Type Coding gene
  • Location Chr5 : 172576-173505 : negative

Gene Family Information

  • ID HOM05D001973
  • #Genes/#Species 335/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G01410.2
  • symbol RSR4
  • Alias ATPDX1,ATPDX1.3,ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.3,PDX1,PDX1.3,PYRIDOXINE BIOSYNTHESIS 1.3
  • full_name REDUCED SUGAR RESPONSE 4
  • uniprot Q8L940

Descriptions

  • Description Aldolase-type TIM barrel family protein
  • Computational description REDUCED SUGAR RESPONSE 4 (RSR4); FUNCTIONS IN: protein homodimerization activity, protein heterodimerization activity; INVOLVED IN: in 12 processes; LOCATED IN: cytosol, endomembrane system, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Vitamin B6 biosynthesis protein (InterPro:IPR001852), Ribulose-phosphate binding barrel (InterPro:IPR011060); BEST Arabidopsis thaliana protein match is: pyridoxine biosynthesis 1.1 (TAIR:AT2G38230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010335
IMP
Gene Ontologyresponse to non-ionic osmotic stress1
GO:0008615
IGI
IBA
Gene Ontologypyridoxine biosynthetic process2 3
GO:0006520
IMP
IBA
Gene Ontologycellular amino acid metabolic process3 4
GO:0042823
IBA
IEA
Gene Ontologypyridoxal phosphate biosynthetic process3
GO:0042823
IEA
InterPropyridoxal phosphate biosynthetic process
GO:0009651
IMP
Gene Ontologyresponse to salt stress1
GO:0042819
IEA
GOA Databasevitamin B6 biosynthetic process
GO:0042819
IGI
Gene Ontologyvitamin B6 biosynthetic process5
GO:0042819
IEA
InterProvitamin B6 biosynthetic process
GO:0010224
IGI
Gene Ontologyresponse to UV-B6
GO:0006979
IMP
Gene Ontologyresponse to oxidative stress2
GO:0006982
IMP
Gene Ontologyresponse to lipid hydroperoxide2
GO:0042538
IMP
Gene Ontologyhyperosmotic salinity response2
GO:0015994
IMP
Gene Ontologychlorophyll metabolic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016843
IBA
Gene Ontologyamine-lyase activity3
GO:0016829
IEA
GOA Databaselyase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0036381
IEA
Gene Ontologypyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0042803
IPI
Gene Ontologyprotein homodimerization activity4
GO:0046982
IPI
Gene Ontologyprotein heterodimerization activity4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
IDA, HDA
Gene Ontologycytosol5 7
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA, HDA
Gene Ontologyplasma membrane2 8
GO:0016020
IEA
GOA Databasemembrane
GO:0012505
IDA
Gene Ontologyendomembrane system2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011060 Ribulose-phosphate binding barrel
IPR033755 PdxS/SNZ N-terminal domain
IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ
IPR013785 Aldolase-type TIM barrel
Mapman id Description
7.7.1.1 Coenzyme metabolism.pyridoxalphosphate biosynthesis.pyridoxal 5'-phosphate synthase complex.synthase component