Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16910 Brassica napus
A07p03630 Brassica napus
A07p15390 Brassica napus
A07p42180 Brassica napus
A08p29150 Brassica napus
A09p11340 Brassica napus
Aa31LG4G6610 Aethionema arabicum
Aa31LG4G6620 Aethionema arabicum
Aa31LG4G6630 Aethionema arabicum
Aa31LG7G5070 Aethionema arabicum
Aa31LG8G14720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1180 Anthoceros agrestis
Actinidia17084 Actinidia chinensis
Actinidia17983 Actinidia chinensis
Actinidia20589 Actinidia chinensis
Actinidia28620 Actinidia chinensis
Actinidia33599 Actinidia chinensis
Actinidia37904 Actinidia chinensis
Ah.05g169490 Amaranthus hybridus
Ah.08g218350 Amaranthus hybridus
AL1G33930 Arabidopsis lyrata
AL2G36650 Arabidopsis lyrata
AL3G50280 Arabidopsis lyrata
Aqoxy5G00957 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BWA67Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FGBY5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ICIJ2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KLF1FJ Arachis hypogaea
AT1G20910 Arabidopsis thaliana
AT1G76510 Arabidopsis thaliana
AT2G17410 Arabidopsis thaliana
ATR0605G323 Amborella trichopoda
Atru.chr13.41 Acer truncatum
Atru.chr3.82 Acer truncatum
Atru.chr3.9 Acer truncatum
Atru.chr5.3587 Acer truncatum
AUR62001255 Chenopodium quinoa
AUR62018992 Chenopodium quinoa
AUR62025753 Chenopodium quinoa
AUR62027834 Chenopodium quinoa
BcaB03g12842 Brassica carinata
BcaB03g14292 Brassica carinata
BcaB03g16502 Brassica carinata
BcaB07g32086 Brassica carinata
BcaB08g34730 Brassica carinata
BcaC04g22977 Brassica carinata
BcaC06g34848 Brassica carinata
BcaC06g36280 Brassica carinata
BcaC07g39065 Brassica carinata
BcaC08g47158 Brassica carinata
BcaC08g47160 Brassica carinata
BcaC08g47237 Brassica carinata
BolC5t30656H Brassica oleracea
BolC6t40100H Brassica oleracea
BolC7t40990H Brassica oleracea
BolC7t42803H Brassica oleracea
BolC8t49678H Brassica oleracea
BraA06t24800Z Brassica rapa
BraA07t28152Z Brassica rapa
BraA07t29278Z Brassica rapa
BraA07t31747Z Brassica rapa
BraA08t34851Z Brassica rapa
BraA09t36772Z Brassica rapa
C05p19540 Brassica napus
C06p50750 Brassica napus
C07p05860 Brassica napus
C07p22710 Brassica napus
C08p20510 Brassica napus
C09p13360 Brassica napus
CAN.G1330.17 Capsicum annuum
CAN.G1645.11 Capsicum annuum
CANSAT25G0858 Cannabis sativa
CANSAT25G1116 Cannabis sativa
CARHR021340 Cardamine hirsuta
CARHR070060 Cardamine hirsuta
CARHR107580 Cardamine hirsuta
Carub.0001s2038 Capsella rubella
Carub.0002s2342 Capsella rubella
Carub.0003s3145 Capsella rubella
Ca_15380_v3 Cicer arietinum L.
Ca_25021_v3 Cicer arietinum L.
Ca_25835_v3 Cicer arietinum L.
Cc09_g10940 Coffea canephora
Cc10_g00200 Coffea canephora
CDE07G1627 Ceratophyllum demersum
Cfa005401 Carpinus fangiana
Cfa007116 Carpinus fangiana
Cfa014145 Carpinus fangiana
Cfa024998 Carpinus fangiana
Ciclev10001099m.g Citrus clementina
Ciclev10025351m.g Citrus clementina
Ciclev10030351m.g Citrus clementina
CiPaw.06G113500 Carya illinoinensis
CiPaw.07G132400 Carya illinoinensis
CiPaw.08G182800 Carya illinoinensis
ClCG10G000090 Citrullus lanatus
COL.COLO4_03301 Corchorus olitorius
COL.COLO4_08582 Corchorus olitorius
COL.COLO4_22570 Corchorus olitorius
Cpa.g.sc26.2 Carica papaya
Cpa.g.sc70.18 Carica papaya
Cpa.g.sc70.21 Carica papaya
CsaV3_3G000100 Cucumis sativus L.
CsaV3_UNG149160 Cucumis sativus L.
CSS0000295 Camellia sinensis var. sinensis
CSS0032336 Camellia sinensis var. sinensis
CSS0043449 Camellia sinensis var. sinensis
CSS0045983 Camellia sinensis var. sinensis
CSS0045992 Camellia sinensis var. sinensis
DCAR_013947 Daucus carota
DCAR_017616 Daucus carota
DCAR_023828 Daucus carota
Dinv05491 Davidia involucrata
Dinv14189 Davidia involucrata
Dinv23327 Davidia involucrata
Dinv23328 Davidia involucrata
Duzib041G0302 Durio zibethinus
Duzib052G0190 Durio zibethinus
Duzib093G1802 Durio zibethinus
Duzib132G0312 Durio zibethinus
Duzib147G1324 Durio zibethinus
Duzib187G1381 Durio zibethinus
Duzib248G0995 Durio zibethinus
ECA233G0941 Erigeron canadensis
ECA246G5155 Erigeron canadensis
EL10Ac1g01082 Beta vulgaris
EL10Ac7g18044 Beta vulgaris
Eucgr.F01815 Eucalyptus grandis
Eucgr.I01546 Eucalyptus grandis
Eucgr.I02198 Eucalyptus grandis
FAN04G2080 Fragaria x ananassa
FAN08G2777 Fragaria x ananassa
FAN13G0926 Fragaria x ananassa
FAN15G2658 Fragaria x ananassa
FAN18G2634 Fragaria x ananassa
FAN19G0305 Fragaria x ananassa
FAN23G0754 Fragaria x ananassa
FAN23G2207 Fragaria x ananassa
FAN23G2324 Fragaria x ananassa
FAN24G3018 Fragaria x ananassa
FAN26G1491 Fragaria x ananassa
FAN26G2801 Fragaria x ananassa
FAN27G1972 Fragaria x ananassa
FAN28G1399 Fragaria x ananassa
FvH4_1g09750 Fragaria vesca
FvH4_2g17130 Fragaria vesca
FvH4_5g29710 Fragaria vesca
Glyma.01G156400 Glycine max
Glyma.04G014100 Glycine max
Glyma.06G013900 Glycine max
Glyma.09G195700 Glycine max
Glyma.11G088400 Glycine max
Glyma.16G114800 Glycine max
Gohir.A01G101700 Gossypium hirsutum
Gohir.A02G179300 Gossypium hirsutum
Gohir.A04G110800 Gossypium hirsutum
Gohir.D01G086800 Gossypium hirsutum
Gohir.D03G000400 Gossypium hirsutum
Gohir.D04G151100 Gossypium hirsutum
Gorai.002G112400 Gossypium raimondii
Gorai.003G000800 Gossypium raimondii
Gorai.012G137700 Gossypium raimondii
GSVIVG01013439001 Vitis vinifera
GSVIVG01026435001 Vitis vinifera
HanXRQChr08g0216791 Helianthus annuus
HanXRQChr12g0367601 Helianthus annuus
HanXRQChr13g0415871 Helianthus annuus
HanXRQChr15g0479761 Helianthus annuus
HanXRQChr15g0490091 Helianthus annuus
Haze_01951 Corylus avellana
Haze_03644 Corylus avellana
Haze_22870 Corylus avellana
Hma1.2p1_0810F.1_g222010 Hydrangea macrophylla
HPP92_023785 Vanilla planifolia
Hund01820 Selenicereus undatus
Hund19680 Selenicereus undatus
Hund19681 Selenicereus undatus
Lalb_Chr09g0324881 Lupinus albus
Lalb_Chr16g0380231 Lupinus albus
Lalb_Chr23g0265481 Lupinus albus
Lj1g0013891 Lotus japonicus
Lj2g0005573 Lotus japonicus
Lj4C813T10 Lonicera japonica
Lj5C170G8 Lonicera japonica
Lsat_1_v5_gn_3_48380 Lactuca sativa
Lsat_1_v5_gn_7_106040 Lactuca sativa
Lsat_1_v5_gn_8_26020 Lactuca sativa
Lsat_1_v5_gn_8_96981 Lactuca sativa
Manes.01G157900 Manihot esculenta
Manes.02G117200 Manihot esculenta
Manes.03G096500 Manihot esculenta
Manes.05G129200 Manihot esculenta
Mapoly0013s0062 Marchantia polymorpha
Mapoly0062s0083 Marchantia polymorpha
MBI01_g22971_MAGBIO Magnolia biondii
MBI04_g40276_MAGBIO Magnolia biondii
MBI18_g22097_MAGBIO Magnolia biondii
MBI18_g39297_MAGBIO Magnolia biondii
MD02G1107900 Malus domestica
MD05G1144500 Malus domestica
MD06G1002900 Malus domestica
MD10G1143800 Malus domestica
MD15G1227400 Malus domestica
Medtr1g033910 Medicago truncatula
Medtr3g116200 Medicago truncatula
Medtr5g024920 Medicago truncatula
MELO3C013704.2 Cucumis melo
Migut.B00002 Erythranthe guttata
Migut.C00350 Erythranthe guttata
Migut.N02992 Erythranthe guttata
MSTRG.16963 Avicennia marina
MSTRG.22077 Avicennia marina
MSTRG.24521 Avicennia marina
MSTRG.24904 Avicennia marina
Nitab4.5_0000464g0040 Nicotiana tabacum
Nitab4.5_0001220g0120 Nicotiana tabacum
Nitab4.5_0009851g0020 Nicotiana tabacum
Nitab4.5_0026542g0010 Nicotiana tabacum
Nn5g31062 Nelumbo nucifera
Nn6g31605 Nelumbo nucifera
Oeu013578.1 Olea europaea
Oeu013579.1 Olea europaea
Oeu025015.1 Olea europaea
Oeu030365.2 Olea europaea
Oeu042502.1 Olea europaea
Oeu050348.1 Olea europaea
Oeu064725.1 Olea europaea
Oeu064726.1 Olea europaea
Os02g0714300 Oryza sativa ssp. japonica
Os06g0622300 Oryza sativa ssp. japonica
Peaxi162Scf00064g00141 Petunia axillaris
Peaxi162Scf00362g00025 Petunia axillaris
Peaxi162Scf00362g00026 Petunia axillaris
Peaxi162Scf00385g00416 Petunia axillaris
PGR119G0941 Punica granatum
PGR142G1359 Punica granatum
PGSC0003DMG400010001 Solanum tuberosum
PGSC0003DMG400021771 Solanum tuberosum
PGSC0003DMG400029311 Solanum tuberosum
PGSC0003DMG400047019 Solanum tuberosum
Phvul.002G119200 Phaseolus vulgaris
Phvul.003G272200 Phaseolus vulgaris
Phvul.009G008800 Phaseolus vulgaris
Phvul.011G128900 Phaseolus vulgaris
Potri.001G456500 Populus trichocarpa
Potri.002G003700 Populus trichocarpa
Potri.004G208900 Populus trichocarpa
Potri.005G257300 Populus trichocarpa
Potri.011G145450 Populus trichocarpa
Pp3c15_24310 Physcomitrium patens
Pp3c9_25220 Physcomitrium patens
Prupe.5G004500 Prunus persica
Prupe.7G187900 Prunus persica
Prupe.8G182600 Prunus persica
Psat2g147320 Pisum sativum
Psat5g008600 Pisum sativum
PSO017G1652 Papaver somniferum
PSO170G0916 Papaver somniferum
PSO541G1739 Papaver somniferum
PSO675G5804 Papaver somniferum
QL02p015933 Quercus lobata
QL06p053362 Quercus lobata
QL11p056901 Quercus lobata
RcHm_v2.0_Chr2g0096711 Rosa chinensis
RcHm_v2.0_Chr6g0274391 Rosa chinensis
RcHm_v2.0_Chr6g0281551 Rosa chinensis
RcHm_v2.0_Chr7g0216981 Rosa chinensis
Rhsim06G0002400 Rhododendron simsii
Rhsim07G0258000 Rhododendron simsii
Rhsim11G0199000 Rhododendron simsii
Sabra02G0002500 Salix brachista
Sabra04G0140800 Salix brachista
Sabra05G0199200 Salix brachista
Sabra11G0130500 Salix brachista
Sabra16G0308800 Salix brachista
SalBow1G8537 Salvia bowleyana
SalBow7G1766 Salvia bowleyana
Sc15g0004030 Simmondsia chinensis
Sc16g0004260 Simmondsia chinensis
Sed0020142 Sechium edule
SEGI_01996 Sequoiadendron giganteum
SGA_v2.0_scaffold227G43168 Striga asiatica
SGA_v2.0_scaffold227G43176 Striga asiatica
SGA_v2.0_scaffold26G11239 Striga asiatica
SMO196G0038 Selaginella moellendorffii
Solyc01g017030.1 Solanum lycopersicum
Solyc01g017790.3 Solanum lycopersicum
Solyc01g018070.3 Solanum lycopersicum
Solyc01g112330.1 Solanum lycopersicum
Solyc01g150121.1 Solanum lycopersicum
Solyc04g025930.3 Solanum lycopersicum
Solyc04g082820.4 Solanum lycopersicum
Solyc05g150102.1 Solanum lycopersicum
Solyc12g095740.3 Solanum lycopersicum
Sopen00g003870 Solanum pennellii
Sopen00g003960 Solanum pennellii
Sopen01g054430 Solanum pennellii
Sopen04g036460 Solanum pennellii
Sopen12g031630 Solanum pennellii
Sopen12g031640 Solanum pennellii
Sp1g18610 Schrenkiella parvula
Sp3g30730 Schrenkiella parvula
Sp5g31670 Schrenkiella parvula
TAR376G1057 Trochodendron aralioides
TAR625G0279 Trochodendron aralioides
TAR628G1369 Trochodendron aralioides
THA.LOC104804300 Tarenaya hassleriana
THA.LOC104812015 Tarenaya hassleriana
THA.LOC104813732 Tarenaya hassleriana
THA.LOC104819703 Tarenaya hassleriana
Thecc.01G001500 Theobroma cacao
Thecc.02G148600 Theobroma cacao
Thecc.08G098700 Theobroma cacao
Thhalv10007750m.g Eutrema salsugineum
Thhalv10018578m.g Eutrema salsugineum
Thhalv10022553m.g Eutrema salsugineum
TPR.G33757 Trifolium pratense
TPR.G38212 Trifolium pratense
TPR.G40454 Trifolium pratense
TWI36G1773 Tripterygium wilfordii
TWI56G0752 Tripterygium wilfordii
TWI73G0267 Tripterygium wilfordii
unitig_21.g20580 Utricularia gibba
unitig_21.g20581 Utricularia gibba
unitig_21.g20853 Utricularia gibba
unitig_578.g16242 Utricularia gibba
unitig_744.g24080 Utricularia gibba
vmacro02348 Vaccinium macrocarpon
vmacro04429 Vaccinium macrocarpon
VMungo0251G2969 Vigna mungo
VMungo1080G0861 Vigna mungo
VMungo1215G0732 Vigna mungo
VMungo1309G0331 Vigna mungo
Zm00001eb109220 Zea mays
Zm00001eb188950 Zea mays
Zm00001eb252640 Zea mays
Zm00001eb275690 Zea mays
Zm00001eb388060 Zea mays

User provided reference genes

Program Settings