Gene: Carub.0001s2038

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s2038
  • Transcript Identifier Carub.0001s2038.1
  • Gene Type Coding gene
  • Location scaffold_1 : 7281453-7284689 : negative

Gene Family Information

  • ID HOM05D001957
  • #Genes/#Species 338/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s2038.v1.1
  • pacid 39229790
  • synonym Carubv10009301m.g

Descriptions

  • Description PTHR15348 - AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT1G20910
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT1G20910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G20910
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G20910
GO:0003680
ISO
PLAZA Integrative Orthologyminor groove of adenine-thymine-rich DNA binding AT1G20910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008978 HSP20-like chaperone
IPR036431 ARID DNA-binding domain superfamily
IPR001606 ARID DNA-binding domain
IPR045147 AT-rich interactive domain-containing protein 3
Mapman id Description
15.5.25 RNA biosynthesis.transcriptional regulation.transcription factor (ARID)