Gene: Carub.0002s2342

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0002s2342
Transcript Identifier Carub.0002s2342.1
Gene Type Coding gene
Location scaffold_2 : 12374439-12377973 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001957
#Genes/#Species 338/95
Phylogenetic origin

ID ORTHO05D002015
#Genes/#Species 326/95
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0002s2342.v1.1
pacid 39244975
synonym Carubv10020299m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR15348 - AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006357	IEA	InterPro	regulation of transcription by RNA polymerase II
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G76510
GO:0006342	ISO	PLAZA Integrative Orthology	chromatin silencing	AT1G76510

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G76510
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G76510

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036431	ARID DNA-binding domain superfamily
IPR001606	ARID DNA-binding domain
IPR008978	HSP20-like chaperone
IPR045147	AT-rich interactive domain-containing protein 3

Mapman id	Description
15.5.25	RNA biosynthesis.transcriptional regulation.transcription factor (ARID)