Gene: ATR0605G323

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0605G323
  • Transcript Identifier ATR0605G323.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00022 : 1750836-1762726 : positive

Gene Family Information

  • ID HOM05D001957
  • #Genes/#Species 338/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00022.121.v1.0
  • pacid 31552254

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT1G20910
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G17410
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT2G17410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G17410
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G20910
GO:0003680
ISO
PLAZA Integrative Orthologyminor groove of adenine-thymine-rich DNA binding AT1G20910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT2G17410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036431 ARID DNA-binding domain superfamily
IPR001606 ARID DNA-binding domain
IPR002068 Alpha crystallin/Hsp20 domain
IPR045147 AT-rich interactive domain-containing protein 3
IPR008978 HSP20-like chaperone
Mapman id Description
15.5.25 RNA biosynthesis.transcriptional regulation.transcription factor (ARID)