Gene: Sopen00g003960

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen00g003960
  • Transcript Identifier Sopen00g003960.1
  • Gene Type Coding gene
  • Location Spenn-ch00 : 9702265-9712079 : positive

Gene Family Information

  • ID HOM05D001957
  • #Genes/#Species 338/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen00g003960.1

Descriptions

  • Description ARID/BRIGHT DNA-binding domain-containing protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 , HSP20-like chaperone , ARID/BRIGHT DNA-binding domain | BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT1G20910
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G17410
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT2G17410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G17410
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G20910
GO:0003680
ISO
PLAZA Integrative Orthologyminor groove of adenine-thymine-rich DNA binding AT1G20910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT2G17410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036431 ARID DNA-binding domain superfamily
IPR001606 ARID DNA-binding domain
IPR045147 AT-rich interactive domain-containing protein 3
IPR008978 HSP20-like chaperone
IPR002068 Alpha crystallin/Hsp20 domain
Mapman id Description
15.5.25 RNA biosynthesis.transcriptional regulation.transcription factor (ARID)