Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p35430 Brassica napus
A06p02530 Brassica napus
A07p19500 Brassica napus
A08p09140 Brassica napus
Aa31LG2G13230 Aethionema arabicum
Aa31LG2G13240 Aethionema arabicum
Aa31LG3G4600 Aethionema arabicum
Aa31LG7G15320 Aethionema arabicum
Aa31LG7G15330 Aethionema arabicum
Aa31LG7G15340 Aethionema arabicum
Aa31LG9G17330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3403 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis
Actinidia06125 Actinidia chinensis
Actinidia11252 Actinidia chinensis
Actinidia28033 Actinidia chinensis
Ah.08g214380 Amaranthus hybridus
AL1G47030 Arabidopsis lyrata
AL3G32430 Arabidopsis lyrata
AL7G43080 Arabidopsis lyrata
AL7G46730 Arabidopsis lyrata
Aqoxy2G01407 Aquilegia oxysepala
Aqoxy2G01413 Aquilegia oxysepala
Aqoxy3G01486 Aquilegia oxysepala
Aqoxy3G01594 Aquilegia oxysepala
Aqoxy3G01595 Aquilegia oxysepala
Aqoxy4G02410 Aquilegia oxysepala
Aqoxy4G02972 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea
AT1G32750 Arabidopsis thaliana
AT3G19040 Arabidopsis thaliana
AT5G37830 Arabidopsis thaliana
ATR0559G108 Amborella trichopoda
ATR0559G369 Amborella trichopoda
ATR1120G087 Amborella trichopoda
Atru.chr12.1853 Acer truncatum
Atru.chr3.3789 Acer truncatum
Atru.chr3.3790 Acer truncatum
Atru.chr3.3791 Acer truncatum
Atru.chr3.3792 Acer truncatum
Atru.chr8.1123 Acer truncatum
Atru.chr8.1124 Acer truncatum
AUR62001097 Chenopodium quinoa
AUR62002404 Chenopodium quinoa
AUR62008924 Chenopodium quinoa
AUR62023793 Chenopodium quinoa
BcaB02g08024 Brassica carinata
BcaB04g17964 Brassica carinata
BcaB04g20722 Brassica carinata
BcaC07g37602 Brassica carinata
BcaC08g43307 Brassica carinata
BcaC08g44352 Brassica carinata
BcaC09g48870 Brassica carinata
BolC1t04467H Brassica oleracea
BolC6t35766H Brassica oleracea
BolC6t36984H Brassica oleracea
BolC8t47960H Brassica oleracea
BraA01t03625Z Brassica rapa
BraA06t23460Z Brassica rapa
BraA07t29656Z Brassica rapa
BraA08t32916Z Brassica rapa
C01p44990 Brassica napus
C06p06540 Brassica napus
C06p17940 Brassica napus
CAN.G584.7 Capsicum annuum
CAN.G97.40 Capsicum annuum
CANSAT01G0692 Cannabis sativa
CANSAT11G1347 Cannabis sativa
CARHR032130 Cardamine hirsuta
CARHR094460 Cardamine hirsuta
CARHR094470 Cardamine hirsuta
CARHR094480 Cardamine hirsuta
CARHR214920 Cardamine hirsuta
Carub.0001s3108 Capsella rubella
Carub.0007s3301 Capsella rubella
Ca_18373_v3 Cicer arietinum L.
Ca_25089_v3 Cicer arietinum L.
CBR_g26059 Chara braunii
CBR_g2821 Chara braunii
CBR_g39219 Chara braunii
Cc02_g20980 Coffea canephora
Cc09_g08410 Coffea canephora
CDE04G1916 Ceratophyllum demersum
CDE07G0097 Ceratophyllum demersum
CDE08G0555 Ceratophyllum demersum
CDE08G1500 Ceratophyllum demersum
CDE09G0131 Ceratophyllum demersum
Cfa005699 Carpinus fangiana
Cfa025426 Carpinus fangiana
Ciclev10004125m.g Citrus clementina
Ciclev10004140m.g Citrus clementina
Ciclev10018533m.g Citrus clementina
CiPaw.05G030600 Carya illinoinensis
CiPaw.10G131100 Carya illinoinensis
ClCG05G003000 Citrullus lanatus
ClCG09G008530 Citrullus lanatus
COL.COLO4_05351 Corchorus olitorius
COL.COLO4_33143 Corchorus olitorius
Cpa.g.c38885 Carica papaya
Cpa.g.sc177.20 Carica papaya
Cpa.g.sc41.77 Carica papaya
Cpa.g.sc471.1 Carica papaya
Cpa.g.sc471.3 Carica papaya
Cpa.g.sc471.4 Carica papaya
Cre02.g141586 Chlamydomonas reinhardtii
Cre03.g175851 Chlamydomonas reinhardtii
Cre07.g325748 Chlamydomonas reinhardtii
Cre10.g425501 Chlamydomonas reinhardtii
CsaV3_6G000030 Cucumis sativus L.
CsaV3_7G026510 Cucumis sativus L.
CSS0032005 Camellia sinensis var. sinensis
CSS0034620 Camellia sinensis var. sinensis
CSS0037154 Camellia sinensis var. sinensis
CSS0040995 Camellia sinensis var. sinensis
DCAR_003140 Daucus carota
DCAR_008727 Daucus carota
DCAR_019148 Daucus carota
Dinv02208 Davidia involucrata
Dinv02213 Davidia involucrata
Dinv10935 Davidia involucrata
Dinv15990 Davidia involucrata
Dinv24157 Davidia involucrata
Duzib132G1189 Durio zibethinus
Duzib212G0078 Durio zibethinus
Duzib248G1173 Durio zibethinus
ECA233G4596 Erigeron canadensis
ECA234G0635 Erigeron canadensis
ECA246G2336 Erigeron canadensis
EL10Ac3g06089 Beta vulgaris
EL10Ac7g17851 Beta vulgaris
Eucgr.I01066 Eucalyptus grandis
Eucgr.I02627 Eucalyptus grandis
FAN01G0178 Fragaria x ananassa
FAN03G1993 Fragaria x ananassa
FAN06G4695 Fragaria x ananassa
FAN10G2279 Fragaria x ananassa
FAN11G3092 Fragaria x ananassa
FAN19G2543 Fragaria x ananassa
FAN21G3055 Fragaria x ananassa
FAN23G0892 Fragaria x ananassa
FAN23G2404 Fragaria x ananassa
FAN25G3599 Fragaria x ananassa
FAN26G2897 Fragaria x ananassa
FAN28G0964 Fragaria x ananassa
FvH4_1g29900 Fragaria vesca
FvH4_3g05980 Fragaria vesca
FvH4_7g07120 Fragaria vesca
Glyma.04G123500 Glycine max
Glyma.08G069400 Glycine max
Glyma.09G215000 Glycine max
Gohir.A03G167300 Gossypium hirsutum
Gohir.A10G142200 Gossypium hirsutum
Gohir.D02G190400 Gossypium hirsutum
Gohir.D10G124300 Gossypium hirsutum
Gorai.005G213100 Gossypium raimondii
Gorai.011G137400 Gossypium raimondii
GSVIVG01020528001 Vitis vinifera
GSVIVG01034203001 Vitis vinifera
HanXRQChr05g0162901 Helianthus annuus
HanXRQChr06g0170531 Helianthus annuus
HanXRQChr10g0312981 Helianthus annuus
Haze_10547 Corylus avellana
Haze_10549 Corylus avellana
Hma1.2p1_0109F.1_g052690 Hydrangea macrophylla
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla
Hma1.2p1_1093F.1_g256120 Hydrangea macrophylla
HPP92_017202 Vanilla planifolia
HPP92_017203 Vanilla planifolia
HPP92_019822 Vanilla planifolia
HPP92_019823 Vanilla planifolia
HPP92_019824 Vanilla planifolia
Hund12383 Selenicereus undatus
Lalb_Chr05g0215381 Lupinus albus
Lalb_Chr05g0217681 Lupinus albus
Lalb_Chr09g0325221 Lupinus albus
Lalb_Chr16g0382831 Lupinus albus
Lalb_Chr16g0382841 Lupinus albus
Lj1P823T23 Lonicera japonica
Lj2C174G11 Lonicera japonica
Lj2g0019889 Lotus japonicus
Lj4g0006057 Lotus japonicus
Lsat_1_v5_gn_0_31600 Lactuca sativa
Lsat_1_v5_gn_1_126141 Lactuca sativa
Lsat_1_v5_gn_4_144240 Lactuca sativa
Lsat_1_v5_gn_4_144260 Lactuca sativa
Lsat_1_v5_gn_5_102200 Lactuca sativa
Lsat_1_v5_gn_5_134300 Lactuca sativa
Lsat_1_v5_gn_6_102941 Lactuca sativa
Lsat_1_v5_gn_6_11080 Lactuca sativa
Lsat_1_v5_gn_6_32821 Lactuca sativa
Lsat_1_v5_gn_6_49360 Lactuca sativa
Lsat_1_v5_gn_6_64721 Lactuca sativa
Lsat_1_v5_gn_7_27720 Lactuca sativa
Manes.07G036600 Manihot esculenta
Manes.11G123000 Manihot esculenta
Mapoly0010s0177 Marchantia polymorpha
Mapoly0035s0055 Marchantia polymorpha
Mapoly0048s0004 Marchantia polymorpha
MBI02_g44614_MAGBIO Magnolia biondii
MBI05_g10862_MAGBIO Magnolia biondii
MCO03G045 Micromonas commoda
MCO14G182 Micromonas commoda
MD02G1239500 Malus domestica
MD04G1047300 Malus domestica
MD07G1077100 Malus domestica
Medtr4g093870 Medicago truncatula
Medtr5g026660 Medicago truncatula
MELO3C021095.2 Cucumis melo
MELO3C021250.2 Cucumis melo
Migut.B00560 Erythranthe guttata
Migut.N00430 Erythranthe guttata
MSTRG.3701 Avicennia marina
Nitab4.5_0000244g0410 Nicotiana tabacum
Nitab4.5_0000761g0030 Nicotiana tabacum
Nitab4.5_0004091g0060 Nicotiana tabacum
Nitab4.5_0005574g0040 Nicotiana tabacum
Nn1g09835 Nelumbo nucifera
Nn2g11723 Nelumbo nucifera
Nn2g12806 Nelumbo nucifera
Nn4g23023 Nelumbo nucifera
Oeu001825.1 Olea europaea
Oeu029564.1 Olea europaea
Oeu029676.1 Olea europaea
Oeu061583.3 Olea europaea
Os01g0966000 Oryza sativa ssp. japonica
Os06g0645700 Oryza sativa ssp. japonica
Os06g0645800 Oryza sativa ssp. japonica
Os06g0645901 Oryza sativa ssp. japonica
Peaxi162Scf00165g01826 Petunia axillaris
Peaxi162Scf00610g00377 Petunia axillaris
PGR004G2098 Punica granatum
PGR042G3669 Punica granatum
PGR142G3997 Punica granatum
PGSC0003DMG400008847 Solanum tuberosum
Phvul.002G127400 Phaseolus vulgaris
Phvul.002G211700 Phaseolus vulgaris
Potri.004G091000 Populus trichocarpa
Potri.007G113300 Populus trichocarpa
Potri.017G047600 Populus trichocarpa
Potri.017G124400 Populus trichocarpa
Pp3c10_350 Physcomitrium patens
Pp3c14_1870 Physcomitrium patens
Pp3c19_22940 Physcomitrium patens
PRCOL_00000485 Prasinoderma coloniale
PRCOL_00004137 Prasinoderma coloniale
Prupe.1G009900 Prunus persica
Prupe.1G558900 Prunus persica
Prupe.1G559000 Prunus persica
Prupe.2G098100 Prunus persica
Psat2g142560 Pisum sativum
Psat7g100640 Pisum sativum
PSO017G7212 Papaver somniferum
PSO063G3818 Papaver somniferum
PSO266G0061 Papaver somniferum
PSO478G1455 Papaver somniferum
PSO675G8698 Papaver somniferum
PSO782G5216 Papaver somniferum
QL02p062665 Quercus lobata
QL03p022329 Quercus lobata
QL03p060281 Quercus lobata
QL03p072736 Quercus lobata
QL04p008924 Quercus lobata
QL06p020738 Quercus lobata
QL11p024034 Quercus lobata
QL11p024040 Quercus lobata
QL11p024047 Quercus lobata
QL11p029100 Quercus lobata
QL11p053735 Quercus lobata
QL12p030812 Quercus lobata
QL12p036527 Quercus lobata
RcHm_v2.0_Chr1g0337071 Rosa chinensis
RcHm_v2.0_Chr3g0492481 Rosa chinensis
RcHm_v2.0_Chr5g0013481 Rosa chinensis
RcHm_v2.0_Chr5g0013491 Rosa chinensis
Rhsim05G0102300 Rhododendron simsii
Rhsim05G0102700 Rhododendron simsii
Rhsim05G0102800 Rhododendron simsii
Rhsim09G0056700 Rhododendron simsii
Sabra04G0061200 Salix brachista
Sabra07G0092600 Salix brachista
Sabra17G0032100 Salix brachista
SalBow1G1280 Salvia bowleyana
SalBow1G2752 Salvia bowleyana
SalBow1G8218 Salvia bowleyana
SalBow2G0807 Salvia bowleyana
Sc14g0006180 Simmondsia chinensis
Sc25g0001620 Simmondsia chinensis
Sed0011905 Sechium edule
Sed0024188 Sechium edule
SEGI_01532 Sequoiadendron giganteum
SEGI_03339 Sequoiadendron giganteum
SEGI_13098 Sequoiadendron giganteum
SEGI_13781 Sequoiadendron giganteum
SEGI_20322 Sequoiadendron giganteum
SEGI_35630 Sequoiadendron giganteum
SEGI_36763 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07136 Striga asiatica
SGA_v2.0_scaffold83G26356 Striga asiatica
SHI12658 Sapria himalayana
SHI37218 Sapria himalayana
SMO118G0440 Selaginella moellendorffii
SMO147G0274 Selaginella moellendorffii
Solyc07g006820.4 Solanum lycopersicum
Solyc09g010560.3 Solanum lycopersicum
Sopen07g002920 Solanum pennellii
Sopen09g005280 Solanum pennellii
Sp1g28210 Schrenkiella parvula
Sp3g17140 Schrenkiella parvula
Sp7g04200 Schrenkiella parvula
TAR374G0100 Trochodendron aralioides
TAR374G1188 Trochodendron aralioides
TAR628G0280 Trochodendron aralioides
TAR636G0878 Trochodendron aralioides
TAR636G1243 Trochodendron aralioides
TAR636G1691 Trochodendron aralioides
TAR636G2347 Trochodendron aralioides
TAR636G2433 Trochodendron aralioides
TAR636G3286 Trochodendron aralioides
THA.LOC104811101 Tarenaya hassleriana
THA.LOC104823845 Tarenaya hassleriana
Thecc.02G153900 Theobroma cacao
Thecc.04G168700 Theobroma cacao
Thhalv10006532m.g Eutrema salsugineum
Thhalv10027622m.g Eutrema salsugineum
TPR.G17275 Trifolium pratense
TPR.G2837 Trifolium pratense
TWI12G0886 Tripterygium wilfordii
TWI14G0424 Tripterygium wilfordii
TWI23G0701 Tripterygium wilfordii
unitig_0.g658 Utricularia gibba
unitig_46.g18832 Utricularia gibba
vmacro19954 Vaccinium macrocarpon
VMungo0251G0025 Vigna mungo
VMungo0251G0821 Vigna mungo
VMungo1215G1229 Vigna mungo
VMungo1215G2376 Vigna mungo
Zm00001eb021240 Zea mays
Zm00001eb386900 Zea mays

User provided reference genes

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