Gene: Solyc07g006820.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g006820.4
  • Transcript Identifier Solyc07g006820.4.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 1640772-1663114 : positive

Gene Family Information

  • ID HOM05D001937
  • #Genes/#Species 341/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g006820.4.1
  • uniprot A0A3Q7H6Q2
  • gene_id Solyc07g006820

Descriptions

  • Description Transcription initiation factor TFIID subunit 1 (AHRD V3.3 *** A0A2G2WAA9_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051123
IBA
GOA DatabaseRNA polymerase II preinitiation complex assembly
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT1G32750
GO:0016573
ISO
PLAZA Integrative Orthologyhistone acetylation AT3G19040
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT3G19040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0016251
IBA
GOA DatabaseRNA polymerase II general transcription initiation factor activity
GO:0017025
IBA
GOA DatabaseTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005669
IBA
GOA Databasetranscription factor TFIID complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR000626 Ubiquitin-like domain
IPR022591 Transcription initiation factor TFIID subunit 1, domain of unknown function
IPR009067 TAFII-230 TBP-binding
IPR041670 Zinc knuckle
IPR040240 Transcription initiation factor TFIID subunit 1
Mapman id Description
15.3.4.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component HAF/TAF1
15.3.4.3.3.4 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component HAF/TAF1