Gene: FAN11G3092
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN11G3092
- Transcript Identifier FAN11G3092.1
- Gene Type Coding gene
- Location Fvb3-4 : 26130766-26140362 : positive
Gene Family Information
- ID HOM05D001937
- #Genes/#Species 341/100
- Phylogenetic origin
- ID ORTHO05D003828
- #Genes/#Species 203/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb3-4-augustus-gene-261.58.v1.0.a1
- pacid 50537137
Descriptions
- Description PF00439//PF09247//PF12157 - Bromodomain (Bromodomain) // TATA box-binding protein binding (TBP-binding) // Protein of unknown function (DUF3591) (DUF3591)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006465 | IEA | InterPro | signal peptide processing | |
| GO:0006508 | IEA | InterPro | proteolysis | |
| GO:0009294 | ISO | PLAZA Integrative Orthology | DNA mediated transformation | AT1G32750 |
| GO:0016573 | ISO | PLAZA Integrative Orthology | histone acetylation | AT3G19040 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT3G19040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004252 | IEA | InterPro | serine-type endopeptidase activity | |
| GO:0008236 | IEA | InterPro | serine-type peptidase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019533 | Peptidase S26 |
| IPR000223 | Peptidase S26A, signal peptidase I |
| IPR040240 | Transcription initiation factor TFIID subunit 1 |
| IPR022591 | Transcription initiation factor TFIID subunit 1, domain of unknown function |
| IPR036427 | Bromodomain-like superfamily |
| IPR029071 | Ubiquitin-like domain superfamily |
| IPR036286 | LexA/Signal peptidase-like superfamily |
| IPR001487 | Bromodomain |
| IPR036741 | TAFII-230 TBP-binding domain superfamily |
| IPR009067 | TAFII-230 TBP-binding |
| Mapman id | Description |
|---|---|
| 15.3.4.2.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component HAF/TAF1 |
| 15.3.4.3.3.4 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component HAF/TAF1 |
| 18.11.2.1.1 | Protein modification.targeting peptide maturation.mitochondrion.IMP inner mitochondrial membrane signal peptidase heterodimer.component IMP1 |