Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10050 Brassica napus
A02p28270 Brassica napus
A03p50990 Brassica napus
A06p47390 Brassica napus
A07p00180 Brassica napus
A09p58830 Brassica napus
Aa31LG5G3050 Aethionema arabicum
Aa31LG6G760 Aethionema arabicum
Aa31LG8G17480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.735 Anthoceros agrestis
Actinidia10882 Actinidia chinensis
Actinidia11001 Actinidia chinensis
Actinidia11108 Actinidia chinensis
Actinidia25946 Actinidia chinensis
Actinidia39329 Actinidia chinensis
Ah.01g004020 Amaranthus hybridus
Ah.01g015560 Amaranthus hybridus
Ah.07g200080 Amaranthus hybridus
AL3G53620 Arabidopsis lyrata
AL7G36430 Arabidopsis lyrata
AL8G15830 Arabidopsis lyrata
AL904U10010 Arabidopsis lyrata
Aqoxy3G02502 Aquilegia oxysepala
Aqoxy4G00629 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18QESW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A9PKKK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D788HE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8U6QL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LEG0TK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SI8X9Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9R3PD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UB10Y8 Arachis hypogaea
AT2G20570 Arabidopsis thaliana
AT4G18020 Arabidopsis thaliana
AT5G44190 Arabidopsis thaliana
ATR0049G045 Amborella trichopoda
ATR0730G226 Amborella trichopoda
Atru.chr6.1768 Acer truncatum
Atru.chr6.2871 Acer truncatum
AUR62007236 Chenopodium quinoa
AUR62018764 Chenopodium quinoa
AUR62019553 Chenopodium quinoa
AUR62037878 Chenopodium quinoa
BcaB03g16853 Brassica carinata
BcaB07g30542 Brassica carinata
BcaB08g34917 Brassica carinata
BcaC03g16639 Brassica carinata
BcaC06g31641 Brassica carinata
BcaC06g31642 Brassica carinata
BcaC06g33604 Brassica carinata
BcaC06g34583 Brassica carinata
BcaC06g36749 Brassica carinata
BcaC07g41206 Brassica carinata
BcaC09g51558 Brassica carinata
BcaNung05099 Brassica carinata
BolC1t01162H Brassica oleracea
BolC2t10516H Brassica oleracea
BolC7t40490H Brassica oleracea
BolC7t43216H Brassica oleracea
BolC7t45445H Brassica oleracea
BolC8t51775H Brassica oleracea
BraA01t00951Z Brassica rapa
BraA02t07862Z Brassica rapa
BraA03t14184Z Brassica rapa
BraA06t27611Z Brassica rapa
BraA07t27811Z Brassica rapa
BraA09t41269Z Brassica rapa
C01p11870 Brassica napus
C02p44730 Brassica napus
C07p00440 Brassica napus
C07p26870 Brassica napus
C07p49390 Brassica napus
C08p42150 Brassica napus
CAN.G201.10 Capsicum annuum
CAN.G209.3 Capsicum annuum
CAN.G782.26 Capsicum annuum
CAN.G799.11 Capsicum annuum
CANSAT21G2302 Cannabis sativa
CANSAT64G1530 Cannabis sativa
CARHR111140 Cardamine hirsuta
CARHR179070 Cardamine hirsuta
CARHR224790 Cardamine hirsuta
Carub.0003s3505 Capsella rubella
Carub.0007s2331 Capsella rubella
Carub.0008s0433 Capsella rubella
Ca_01481_v3 Cicer arietinum L.
Ca_18921_v3 Cicer arietinum L.
Ca_19123_v3 Cicer arietinum L.
Ca_22046_v3 Cicer arietinum L.
Ca_24635_v3 Cicer arietinum L.
CBR_g57032 Chara braunii
CBR_g57033 Chara braunii
Cc05_g07710 Coffea canephora
Cc08_g02100 Coffea canephora
CDE02G4233 Ceratophyllum demersum
CDE04G1136 Ceratophyllum demersum
CDE08G0786 Ceratophyllum demersum
CDE08G0897 Ceratophyllum demersum
CDE09G1312 Ceratophyllum demersum
CDE10G0989 Ceratophyllum demersum
CDE10G1015 Ceratophyllum demersum
Cfa014658 Carpinus fangiana
Ciclev10015266m.g Citrus clementina
Ciclev10031120m.g Citrus clementina
CiPaw.03G181300 Carya illinoinensis
CiPaw.04G128900 Carya illinoinensis
CiPaw.11G088000 Carya illinoinensis
ClCG00G000680 Citrullus lanatus
ClCG09G012330 Citrullus lanatus
ClCG10G001890 Citrullus lanatus
COL.COLO4_03694 Corchorus olitorius
COL.COLO4_17104 Corchorus olitorius
COL.COLO4_17105 Corchorus olitorius
Cpa.g.sc6.428 Carica papaya
Cpa.g.sc83.93 Carica papaya
CsaV3_1G017010 Cucumis sativus L.
CsaV3_2G034410 Cucumis sativus L.
CsaV3_3G002030 Cucumis sativus L.
CsaV3_3G049490 Cucumis sativus L.
CSS0000687 Camellia sinensis var. sinensis
CSS0001889 Camellia sinensis var. sinensis
CSS0036016 Camellia sinensis var. sinensis
CSS0037714 Camellia sinensis var. sinensis
DCAR_008297 Daucus carota
DCAR_013033 Daucus carota
DCAR_021264 Daucus carota
Dinv01519 Davidia involucrata
Dinv06860 Davidia involucrata
Dinv08780 Davidia involucrata
Dinv22055 Davidia involucrata
Dinv25187 Davidia involucrata
Dinv28920 Davidia involucrata
Duzib052G0251 Durio zibethinus
Duzib068G0312 Durio zibethinus
Duzib084G1148 Durio zibethinus
Duzib132G0680 Durio zibethinus
Duzib205G1207 Durio zibethinus
Duzib248G0220 Durio zibethinus
ECA233G0090 Erigeron canadensis
EL10Ac5g12185 Beta vulgaris
EL10Ac9g20816 Beta vulgaris
Eucgr.A01857 Eucalyptus grandis
Eucgr.E00308 Eucalyptus grandis
Eucgr.K01056 Eucalyptus grandis
FAN02G2269 Fragaria x ananassa
FAN04G0921 Fragaria x ananassa
FAN05G5595 Fragaria x ananassa
FAN08G0643 Fragaria x ananassa
FAN09G0107 Fragaria x ananassa
FAN13G0588 Fragaria x ananassa
FAN14G2738 Fragaria x ananassa
FAN18G1055 Fragaria x ananassa
FvH4_5g21280 Fragaria vesca
FvH4_6g26660 Fragaria vesca
Glyma.01G200800 Glycine max
Glyma.05G070200 Glycine max
Glyma.06G289300 Glycine max
Glyma.11G041300 Glycine max
Glyma.12G117700 Glycine max
Glyma.12G206600 Glycine max
Glyma.13G294300 Glycine max
Glyma.17G152800 Glycine max
Gohir.A01G019600 Gossypium hirsutum
Gohir.A03G002500 Gossypium hirsutum
Gohir.A04G102600 Gossypium hirsutum
Gohir.A08G159400 Gossypium hirsutum
Gohir.A12G139200 Gossypium hirsutum
Gohir.A12G210500 Gossypium hirsutum
Gohir.D01G018100 Gossypium hirsutum
Gohir.D03G169800 Gossypium hirsutum
Gohir.D04G141500 Gossypium hirsutum
Gohir.D08G179832 Gossypium hirsutum
Gohir.D12G143700 Gossypium hirsutum
Gohir.D12G213200 Gossypium hirsutum
Gorai.002G020300 Gossypium raimondii
Gorai.003G180100 Gossypium raimondii
Gorai.004G188300 Gossypium raimondii
Gorai.008G155000 Gossypium raimondii
Gorai.008G228800 Gossypium raimondii
Gorai.012G126600 Gossypium raimondii
GSVIVG01013234001 Vitis vinifera
GSVIVG01020604001 Vitis vinifera
HanXRQChr05g0140571 Helianthus annuus
HanXRQChr10g0305491 Helianthus annuus
HanXRQChr16g0511501 Helianthus annuus
Haze_08293 Corylus avellana
Haze_13237 Corylus avellana
Haze_13240 Corylus avellana
Hma1.2p1_0002F.1_g002250 Hydrangea macrophylla
Hma1.2p1_0414F.1_g147780 Hydrangea macrophylla
HPP92_000502 Vanilla planifolia
HPP92_000516 Vanilla planifolia
HPP92_020913 Vanilla planifolia
Hund07873 Selenicereus undatus
Hund11268 Selenicereus undatus
Hund14426 Selenicereus undatus
Lalb_Chr01g0005081 Lupinus albus
Lalb_Chr05g0214071 Lupinus albus
Lalb_Chr05g0220661 Lupinus albus
Lalb_Chr09g0323931 Lupinus albus
Lalb_Chr14g0367131 Lupinus albus
Lalb_Chr16g0379201 Lupinus albus
Lalb_Chr16g0386131 Lupinus albus
Lalb_Chr16g0386141 Lupinus albus
Lj1A691T59 Lonicera japonica
Lj1A691T60 Lonicera japonica
Lj2C245G6 Lonicera japonica
Lj2g0001410 Lotus japonicus
Lj3g0010240 Lotus japonicus
Lj3g0020779 Lotus japonicus
Lj4g0007873 Lotus japonicus
Lj8C107G7 Lonicera japonica
Lsat_1_v5_gn_4_65921 Lactuca sativa
Lsat_1_v5_gn_5_73301 Lactuca sativa
Lsat_1_v5_gn_6_66681 Lactuca sativa
Manes.12G089800 Manihot esculenta
Manes.13G142200 Manihot esculenta
Manes.15G173500 Manihot esculenta
Manes.17G019500 Manihot esculenta
Mapoly0156s0007 Marchantia polymorpha
MBI04_g31971_MAGBIO Magnolia biondii
MBI06_g04398_MAGBIO Magnolia biondii
MBI07_g17466_MAGBIO Magnolia biondii
MBI07_g38296_MAGBIO Magnolia biondii
MBI07_g44130_MAGBIO Magnolia biondii
MD06G1039500 Malus domestica
MD09G1241800 Malus domestica
MD16G1269900 Malus domestica
MD17G1234400 Malus domestica
Medtr2g090675 Medicago truncatula
Medtr4g078810 Medicago truncatula
Medtr4g098870 Medicago truncatula
Medtr5g014040 Medicago truncatula
MELO3C003375.2 Cucumis melo
MELO3C013874.2 Cucumis melo
MELO3C019337.2 Cucumis melo
Migut.H02158 Erythranthe guttata
Migut.M00145 Erythranthe guttata
Migut.M00147 Erythranthe guttata
MSTRG.15128 Avicennia marina
MSTRG.15129 Avicennia marina
Nitab4.5_0000621g0130 Nicotiana tabacum
Nitab4.5_0002055g0150 Nicotiana tabacum
Nitab4.5_0002773g0050 Nicotiana tabacum
Nitab4.5_0003100g0090 Nicotiana tabacum
Nitab4.5_0004327g0030 Nicotiana tabacum
Nitab4.5_0004658g0020 Nicotiana tabacum
Nitab4.5_0006815g0010 Nicotiana tabacum
Nitab4.5_0010689g0010 Nicotiana tabacum
Nn1g00605 Nelumbo nucifera
Nn1g04111 Nelumbo nucifera
Nn1g04233 Nelumbo nucifera
Nn1g06422 Nelumbo nucifera
Nn6g33664 Nelumbo nucifera
Oeu016907.1 Olea europaea
Oeu028033.3 Olea europaea
Oeu036082.1 Olea europaea
Oeu053057.1 Olea europaea
Oeu053058.1 Olea europaea
Os01g0239000 Oryza sativa ssp. japonica
Os06g0348800 Oryza sativa ssp. japonica
Peaxi162Scf00248g00125 Petunia axillaris
Peaxi162Scf00312g00089 Petunia axillaris
Peaxi162Scf00497g00086 Petunia axillaris
Peaxi162Scf00845g00116 Petunia axillaris
PGR042G2029 Punica granatum
PGR042G3571 Punica granatum
PGR142G3450 Punica granatum
PGSC0003DMG400009378 Solanum tuberosum
PGSC0003DMG400021857 Solanum tuberosum
PGSC0003DMG400024217 Solanum tuberosum
PGSC0003DMG400026587 Solanum tuberosum
Phvul.002G004800 Phaseolus vulgaris
Phvul.003G068200 Phaseolus vulgaris
Phvul.003G228600 Phaseolus vulgaris
Phvul.005G092900 Phaseolus vulgaris
Phvul.005G100700 Phaseolus vulgaris
Phvul.011G124200 Phaseolus vulgaris
Potri.001G146200 Populus trichocarpa
Potri.003G087700 Populus trichocarpa
Potri.007G136901 Populus trichocarpa
Potri.017G015800 Populus trichocarpa
Pp3c11_21140 Physcomitrium patens
Pp3c7_5800 Physcomitrium patens
Prupe.3G127700 Prunus persica
Prupe.5G045000 Prunus persica
Psat2g174400 Pisum sativum
Psat4g078160 Pisum sativum
Psat4g078200 Pisum sativum
Psat4g078240 Pisum sativum
Psat5g273760 Pisum sativum
Psat7g167800 Pisum sativum
PSO063G2488 Papaver somniferum
PSO210G3354 Papaver somniferum
PSO782G0165 Papaver somniferum
PSO832G3363 Papaver somniferum
QL08p040168 Quercus lobata
QL12p006931 Quercus lobata
RcHm_v2.0_Chr2g0127161 Rosa chinensis
RcHm_v2.0_Chr7g0208371 Rosa chinensis
Rhsim04G0071000 Rhododendron simsii
Rhsim06G0137200 Rhododendron simsii
Rhsim11G0011500 Rhododendron simsii
Sabra01G0115000 Salix brachista
Sabra03G0057600 Salix brachista
Sabra07G0110200 Salix brachista
Sabra17G0012300 Salix brachista
SalBow7G1194 Salvia bowleyana
SalBow7G3603 Salvia bowleyana
SalBow7G3703 Salvia bowleyana
Sc01g0007720 Simmondsia chinensis
Sc06g0009310 Simmondsia chinensis
Sc12g0003220 Simmondsia chinensis
Sed0011482 Sechium edule
Sed0015847 Sechium edule
Sed0024038 Sechium edule
SEGI_02853 Sequoiadendron giganteum
SEGI_40150 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13922 Striga asiatica
SGA_v2.0_scaffold70G23493 Striga asiatica
SMO332G0040 Selaginella moellendorffii
SMO343G0043 Selaginella moellendorffii
Solyc06g061030.3 Solanum lycopersicum
Solyc07g053630.4 Solanum lycopersicum
Solyc08g077230.3 Solanum lycopersicum
Solyc10g008160.3 Solanum lycopersicum
Sopen06g021230 Solanum pennellii
Sopen07g027580 Solanum pennellii
Sopen08g025810 Solanum pennellii
Sopen10g004030 Solanum pennellii
Sp2g09010 Schrenkiella parvula
Sp3g33790 Schrenkiella parvula
Sp7g16100 Schrenkiella parvula
TAR375G0005 Trochodendron aralioides
TAR624G0678 Trochodendron aralioides
TAR629G3324 Trochodendron aralioides
TAR636G1186 Trochodendron aralioides
THA.LOC104801563 Tarenaya hassleriana
THA.LOC104804532 Tarenaya hassleriana
THA.LOC104813341 Tarenaya hassleriana
THA.LOC104827744 Tarenaya hassleriana
Thecc.02G185900 Theobroma cacao
Thecc.03G233600 Theobroma cacao
Thhalv10001986m.g Eutrema salsugineum
Thhalv10003223m.g Eutrema salsugineum
Thhalv10024919m.g Eutrema salsugineum
TPR.G19197 Trifolium pratense
TPR.G27537 Trifolium pratense
TPR.G6385 Trifolium pratense
TPR.G9350 Trifolium pratense
TWI15G0295 Tripterygium wilfordii
TWI59G0393 Tripterygium wilfordii
TWI60G0553 Tripterygium wilfordii
TWI81G0709 Tripterygium wilfordii
unitig_0.g1972 Utricularia gibba
unitig_62.g23330 Utricularia gibba
unitig_746.g26674 Utricularia gibba
unitig_85.g27366 Utricularia gibba
vmacro00350 Vaccinium macrocarpon
vmacro09247 Vaccinium macrocarpon
vmacro12344 Vaccinium macrocarpon
VMungo0251G1596 Vigna mungo
VMungo1080G0227 Vigna mungo
VMungo1215G0556 Vigna mungo
Zm00001eb118900 Zea mays
Zm00001eb371980 Zea mays

User provided reference genes

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