Gene: Potri.003G087700
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.003G087700
- Transcript Identifier Potri.003G087700.22
- Gene Type Coding gene
- Location Chr03 : 11440252-11445141 : positive
Gene Family Information
- ID HOM05D001783
- #Genes/#Species 366/96
- Phylogenetic origin
- ID ORTHO05D005379
- #Genes/#Species 159/83
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.003G087700.v4.1
- pacid 42785456
- synonym estExt_fgenesh4_pg.C_1180049
Descriptions
- Description PTHR31312//PTHR31312:SF2 - FAMILY NOT NAMED // TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | IEA | InterPro | positive regulation of transcription, DNA-templated | |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT4G18020 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G18020 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G18020 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G18020 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.3 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP) |