Gene: Carub.0003s3505

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s3505
  • Transcript Identifier Carub.0003s3505.1
  • Gene Type Coding gene
  • Location scaffold_3 : 14856314-14858462 : positive

Gene Family Information

  • ID HOM05D001783
  • #Genes/#Species 366/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s3505.v1.1
  • pacid 39239869
  • synonym Carubv10014114m.g

Descriptions

  • Description PTHR31312:SF1 - TRANSCRIPTION ACTIVATOR GLK1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEA
InterPropositive regulation of transcription, DNA-templated
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction AT2G20570
GO:1900056
ISO
PLAZA Integrative Orthologynegative regulation of leaf senescence AT2G20570
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT2G20570
GO:0010638
ISO
PLAZA Integrative Orthologypositive regulation of organelle organization Os06g0348800
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G20570
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT2G20570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G20570
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G20570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006447 Myb domain, plants
IPR044825 Transcription activator GLK1/2-like
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
Mapman id Description
15.5.2.3 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)