Gene: COL.COLO4_03694

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_03694
  • Transcript Identifier COL.rna2550
  • Gene Type Coding gene
  • Location AWUE01010302.1 : 5136-8155 : negative

Gene Family Information

  • ID HOM05D001783
  • #Genes/#Species 366/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna2550
  • GenBank OMP11767.1
  • id gene3667
  • gene_name COLO4_03694
  • uniprot A0A1R3KXK1

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0045893
IEA
InterPropositive regulation of transcription, DNA-templated
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction AT2G20570
GO:1900056
ISO
PLAZA Integrative Orthologynegative regulation of leaf senescence AT5G44190
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT5G44190
GO:0010638
ISO
PLAZA Integrative Orthologypositive regulation of organelle organization Os06g0348800
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G44190
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT5G44190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44190
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G20570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR017930 Myb domain
IPR006447 Myb domain, plants
IPR044825 Transcription activator GLK1/2-like
Mapman id Description
15.5.2.3 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)