Gene: Sopen10g004030

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g004030
  • Transcript Identifier Sopen10g004030.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 2457873-2460982 : positive

Gene Family Information

  • ID HOM05D001783
  • #Genes/#Species 366/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g004030.1

Descriptions

  • Description Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus. | GBFs pro-rich region-interacting factor 1 (GPRI1) | CONTAINS InterPro DOMAIN/s: Homeodomain-like , Myb, DNA-binding , Myb-like DNA-binding domain, SHAQKYF class , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related | BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 .
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IEA
InterPropositive regulation of transcription, DNA-templated
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction AT2G20570
GO:1900056
ISO
PLAZA Integrative Orthologynegative regulation of leaf senescence AT5G44190
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT5G44190
GO:0010638
ISO
PLAZA Integrative Orthologypositive regulation of organelle organization Os06g0348800
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G44190
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT5G44190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44190
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G20570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G44190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR006447 Myb domain, plants
IPR009057 Homeobox-like domain superfamily
IPR044825 Transcription activator GLK1/2-like
Mapman id Description
15.5.2.3 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)