Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28550 Brassica napus
A03p32530 Brassica napus
A03p32550 Brassica napus
A09p40800 Brassica napus
Aa31LG11G14600 Aethionema arabicum
Aa31LG7G7860 Aethionema arabicum
Aa31LG7G7870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4680 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4280 Anthoceros agrestis
Actinidia08180 Actinidia chinensis
Actinidia08182 Actinidia chinensis
Actinidia33972 Actinidia chinensis
Ah.02g131560 Amaranthus hybridus
Ah.10g033540 Amaranthus hybridus
AL1G37890 Arabidopsis lyrata
AL1G37900 Arabidopsis lyrata
AL243U10010 Arabidopsis lyrata
AL2G19580 Arabidopsis lyrata
AL3G10770 Arabidopsis lyrata
AL3G10790 Arabidopsis lyrata
AL5G21750 Arabidopsis lyrata
AL8G25330 Arabidopsis lyrata
Aqoxy3G03078 Aquilegia oxysepala
Aqoxy3G03080 Aquilegia oxysepala
Aqoxy7G02278 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00SZA6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.16295S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84PEGK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8SCN2T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2BAJG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AP71DE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DY3LDE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FENI28 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IPVE35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R60S14 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.REN86K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TA8DPM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XWU7PI Arachis hypogaea
AT1G24090 Arabidopsis thaliana
AT1G24095 Arabidopsis thaliana
AT3G01410 Arabidopsis thaliana
AT5G51080 Arabidopsis thaliana
ATR0730G216 Amborella trichopoda
ATR1089G114 Amborella trichopoda
Atru.chr11.1963 Acer truncatum
Atru.chr11.1965 Acer truncatum
Atru.chr8.2425 Acer truncatum
AUR62026581 Chenopodium quinoa
AUR62026582 Chenopodium quinoa
AUR62039405 Chenopodium quinoa
AUR62039406 Chenopodium quinoa
BcaB04g21416 Brassica carinata
BcaB07g32380 Brassica carinata
BcaC04g19000 Brassica carinata
BcaC05g26303 Brassica carinata
BcaC05g26305 Brassica carinata
BcaC09g47664 Brassica carinata
BNapus_Darmor_BZH_scaffold_133p00060 Brassica napus
BolC1t05954H Brassica oleracea
BolC3t16227H Brassica oleracea
BolC5t31021H Brassica oleracea
BraA01t04662Z Brassica rapa
BraA03t12057Z Brassica rapa
BraA03t12422Z Brassica rapa
BraA03t12424Z Brassica rapa
BraA09t39574Z Brassica rapa
C03p39610 Brassica napus
C03p39630 Brassica napus
C05p23190 Brassica napus
CAN.G1028.2 Capsicum annuum
CAN.G1160.1 Capsicum annuum
CAN.G1649.1 Capsicum annuum
CAN.G983.1 Capsicum annuum
CANSAT25G2126 Cannabis sativa
CANSAT35G0663 Cannabis sativa
CANSAT64G0713 Cannabis sativa
CANSAT64G2730 Cannabis sativa
CANSAT78G0546 Cannabis sativa
CARHR024370 Cardamine hirsuta
CARHR024380 Cardamine hirsuta
CARHR075560 Cardamine hirsuta
Carub.0001s2352 Capsella rubella
Carub.0001s2353 Capsella rubella
Carub.0008s1108 Capsella rubella
Ca_03698_v3 Cicer arietinum L.
Ca_03703_v3 Cicer arietinum L.
Ca_04218_v3 Cicer arietinum L.
Ca_22778_v3 Cicer arietinum L.
CBR_g10975 Chara braunii
CBR_g30818 Chara braunii
CBR_g38731 Chara braunii
Cc07_g02530 Coffea canephora
Cc08_g11240 Coffea canephora
Cc11_g13600 Coffea canephora
Cc11_g14250 Coffea canephora
CDE02G3381 Ceratophyllum demersum
CDE04G3384 Ceratophyllum demersum
CDE05G3134 Ceratophyllum demersum
Cfa007463 Carpinus fangiana
Cfa009103 Carpinus fangiana
Ciclev10012229m.g Citrus clementina
Ciclev10031867m.g Citrus clementina
Ciclev10033984m.g Citrus clementina
CiPaw.06G074800 Carya illinoinensis
ClCG00G005090 Citrullus lanatus
ClCG05G025030 Citrullus lanatus
ClCG09G020670 Citrullus lanatus
ClCG10G014490 Citrullus lanatus
COL.COLO4_32002 Corchorus olitorius
COL.COLO4_32003 Corchorus olitorius
COL.COLO4_37898 Corchorus olitorius
Cpa.g.sc5.350 Carica papaya
Cpa.g.sc5.352 Carica papaya
Cre06.g272550 Chlamydomonas reinhardtii
CsaV3_3G042080 Cucumis sativus L.
CsaV3_5G025720 Cucumis sativus L.
CsaV3_5G031860 Cucumis sativus L.
CSS0004418 Camellia sinensis var. sinensis
CSS0010802 Camellia sinensis var. sinensis
CSS0013441 Camellia sinensis var. sinensis
CSS0030261 Camellia sinensis var. sinensis
CSS0041273 Camellia sinensis var. sinensis
CSS0041586 Camellia sinensis var. sinensis
CSS0041634 Camellia sinensis var. sinensis
CSS0043491 Camellia sinensis var. sinensis
DCAR_013958 Daucus carota
DCAR_026553 Daucus carota
DCAR_031083 Daucus carota
Dinv30998 Davidia involucrata
Dinv31105 Davidia involucrata
Duzib248G1036 Durio zibethinus
Duzib264G0133 Durio zibethinus
Duzib268G0426 Durio zibethinus
Duzib268G0433 Durio zibethinus
ECA232G0020 Erigeron canadensis
ECA232G0267 Erigeron canadensis
ECA232G0979 Erigeron canadensis
ECA232G3051 Erigeron canadensis
ECA233G4649 Erigeron canadensis
ECA246G4654 Erigeron canadensis
EL10Ac2g03377 Beta vulgaris
EL10Ac5g10984 Beta vulgaris
EL10Ac5g11364 Beta vulgaris
EL10Ac6g13729 Beta vulgaris
EL10Ac6g13730 Beta vulgaris
EL10Ac6g14125 Beta vulgaris
EL10Ac9g21122 Beta vulgaris
Eucgr.B02559 Eucalyptus grandis
Eucgr.I01834 Eucalyptus grandis
Eucgr.J02177 Eucalyptus grandis
FAN07G2318 Fragaria x ananassa
FAN12G1851 Fragaria x ananassa
FAN22G0616 Fragaria x ananassa
FvH4_2g39271 Fragaria vesca
FvH4_4g34981 Fragaria vesca
FvH4_4g35000 Fragaria vesca
FvH4_6g50271 Fragaria vesca
Glyma.01G026900 Glycine max
Glyma.02G037900 Glycine max
Gohir.A03G142400 Gossypium hirsutum
Gohir.D02G165700 Gossypium hirsutum
Gorai.005G185700 Gossypium raimondii
Gorai.005G185800 Gossypium raimondii
Gorai.007G077300 Gossypium raimondii
Gorai.009G350100 Gossypium raimondii
GSVIVG01020170001 Vitis vinifera
GSVIVG01020171001 Vitis vinifera
GSVIVG01032526001 Vitis vinifera
HanXRQChr03g0073251 Helianthus annuus
HanXRQChr04g0103621 Helianthus annuus
HanXRQChr09g0266021 Helianthus annuus
HanXRQChr11g0323641 Helianthus annuus
HanXRQChr12g0371331 Helianthus annuus
HanXRQChr12g0385551 Helianthus annuus
HanXRQChr15g0476641 Helianthus annuus
Haze_12139 Corylus avellana
Haze_12140 Corylus avellana
Hma1.2p1_0160F.1_g070590 Hydrangea macrophylla
Hma1.2p1_0375F.1_g139080 Hydrangea macrophylla
Hma1.2p1_0967F.1_g242413 Hydrangea macrophylla
HPP92_017336 Vanilla planifolia
HPP92_022398 Vanilla planifolia
HPP92_027514 Vanilla planifolia
Hund05955 Selenicereus undatus
Hund05956 Selenicereus undatus
Hund12490 Selenicereus undatus
Hund25316 Selenicereus undatus
Lalb_Chr02g0159771 Lupinus albus
Lalb_Chr05g0228001 Lupinus albus
Lalb_Chr09g0326501 Lupinus albus
Lj1C962G6 Lonicera japonica
Lj2g0005228 Lotus japonicus
Lj2g0027896 Lotus japonicus
Lj3C1049G3 Lonicera japonica
Lj4g0014493 Lotus japonicus
Lj7A409G61 Lonicera japonica
Lj8C67G0 Lonicera japonica
Lsat_1_v5_gn_2_92740 Lactuca sativa
Lsat_1_v5_gn_3_49101 Lactuca sativa
Lsat_1_v5_gn_4_181900 Lactuca sativa
Lsat_1_v5_gn_4_6521 Lactuca sativa
Lsat_1_v5_gn_6_10081 Lactuca sativa
Lsat_1_v5_gn_6_74241 Lactuca sativa
Lsat_1_v5_gn_8_160200 Lactuca sativa
Lsat_1_v5_gn_8_22320 Lactuca sativa
Manes.01G196800 Manihot esculenta
MBI14_g12607_MAGBIO Magnolia biondii
MBI14_g34517_MAGBIO Magnolia biondii
MBI14_g34524_MAGBIO Magnolia biondii
MD09G1038000 Malus domestica
MD13G1087000 Malus domestica
MD15G1022000 Malus domestica
MD16G1087300 Malus domestica
MD16G1087400 Malus domestica
MD17G1039000 Malus domestica
Medtr5g035310 Medicago truncatula
MELO3C002906.2 Cucumis melo
MELO3C009928.2 Cucumis melo
MELO3C012024.2 Cucumis melo
Migut.E00140 Erythranthe guttata
Migut.H00152 Erythranthe guttata
Migut.K01362 Erythranthe guttata
Migut.L01443 Erythranthe guttata
Migut.L01445 Erythranthe guttata
MSTRG.23987 Avicennia marina
MSTRG.618 Avicennia marina
MSTRG.621 Avicennia marina
MSTRG.7875 Avicennia marina
Nitab4.5_0000031g0340 Nicotiana tabacum
Nitab4.5_0000069g0440 Nicotiana tabacum
Nitab4.5_0000257g0250 Nicotiana tabacum
Nitab4.5_0000257g0260 Nicotiana tabacum
Nitab4.5_0001727g0070 Nicotiana tabacum
Nitab4.5_0001952g0180 Nicotiana tabacum
Nitab4.5_0002199g0030 Nicotiana tabacum
Nitab4.5_0005206g0030 Nicotiana tabacum
Nitab4.5_0005722g0020 Nicotiana tabacum
Nitab4.5_0005722g0030 Nicotiana tabacum
Nitab4.5_0006492g0030 Nicotiana tabacum
Nitab4.5_0006834g0010 Nicotiana tabacum
Nn3g16975 Nelumbo nucifera
Nn4g22098 Nelumbo nucifera
Nn4g22883 Nelumbo nucifera
Oeu001658.1 Olea europaea
Oeu012249.2 Olea europaea
Oeu018693.1 Olea europaea
Oeu025444.1 Olea europaea
Oeu031512.1 Olea europaea
Oeu031513.1 Olea europaea
Oeu031634.1 Olea europaea
Oeu047334.1 Olea europaea
Os06g0237100 Oryza sativa ssp. japonica
Os08g0177800 Oryza sativa ssp. japonica
Os10g0458700 Oryza sativa ssp. japonica
Peaxi162Scf00097g01219 Petunia axillaris
Peaxi162Scf00129g00826 Petunia axillaris
Peaxi162Scf00368g00117 Petunia axillaris
Peaxi162Scf00421g00710 Petunia axillaris
Peaxi162Scf00421g00712 Petunia axillaris
PGR083G2406 Punica granatum
PGR119G1314 Punica granatum
PGSC0003DMG400001921 Solanum tuberosum
PGSC0003DMG400015576 Solanum tuberosum
PGSC0003DMG400015577 Solanum tuberosum
PGSC0003DMG400035480 Solanum tuberosum
PGSC0003DMG402016404 Solanum tuberosum
Phvul.002G059700 Phaseolus vulgaris
Phvul.003G055000 Phaseolus vulgaris
Potri.008G147000 Populus trichocarpa
Pp3c10_1390 Physcomitrium patens
Pp3c17_12460 Physcomitrium patens
Pp3c2_18530 Physcomitrium patens
Pp3c2_25170 Physcomitrium patens
Pp3c4_14290 Physcomitrium patens
PRCOL_00000252 Prasinoderma coloniale
PRCOL_00002414 Prasinoderma coloniale
PRCOL_00002985 Prasinoderma coloniale
Prupe.1G259600 Prunus persica
Prupe.1G259700 Prunus persica
Prupe.1G373800 Prunus persica
Prupe.3G280000 Prunus persica
Psat1g060200 Pisum sativum
Psat1g063040 Pisum sativum
Psat2g111480 Pisum sativum
Psat4g042240 Pisum sativum
Psat4g126200 Pisum sativum
Psat4g126440 Pisum sativum
Psat7g022400 Pisum sativum
Psat7g024080 Pisum sativum
Psat7g024120 Pisum sativum
Psat7g028400 Pisum sativum
Psat7g105040 Pisum sativum
Psat7g105080 Pisum sativum
Psat7g232880 Pisum sativum
Psat7g232920 Pisum sativum
PSO063G0131 Papaver somniferum
PSO063G3023 Papaver somniferum
PSO063G4956 Papaver somniferum
PSO063G6989 Papaver somniferum
PSO832G0212 Papaver somniferum
PSO832G0532 Papaver somniferum
QL02p077697 Quercus lobata
QL03p062472 Quercus lobata
QL03p062480 Quercus lobata
RcHm_v2.0_Chr2g0170591 Rosa chinensis
RcHm_v2.0_Chr4g0444511 Rosa chinensis
RcHm_v2.0_Chr4g0444521 Rosa chinensis
RcHm_v2.0_Chr6g0245201 Rosa chinensis
RcHm_v2.0_Chr6g0301731 Rosa chinensis
Rhsim08G0056900 Rhododendron simsii
Rhsim08G0061200 Rhododendron simsii
Rhsim12G0048800 Rhododendron simsii
Rhsim12G0050200 Rhododendron simsii
Sabra08G0111800 Salix brachista
Sabra08G0111900 Salix brachista
Sabra10G0067400 Salix brachista
SalBow2G0686 Salvia bowleyana
SalBow2G2592 Salvia bowleyana
Sc11g0001360 Simmondsia chinensis
Sc14g0008550 Simmondsia chinensis
Sed0007819 Sechium edule
Sed0019838 Sechium edule
Sed0025692 Sechium edule
Sed0027377 Sechium edule
SEGI_04544 Sequoiadendron giganteum
SEGI_15436 Sequoiadendron giganteum
SGA_v2.0_scaffold205G41722 Striga asiatica
SGA_v2.0_scaffold87G27000 Striga asiatica
SGA_v2.0_scaffold8G04244 Striga asiatica
SGA_v2.0_scaffold8G04246 Striga asiatica
SHI21651 Sapria himalayana
SHI21653 Sapria himalayana
SHI21654 Sapria himalayana
SMO147G0177 Selaginella moellendorffii
SMO357G0003 Selaginella moellendorffii
Solyc01g008060.3 Solanum lycopersicum
Solyc02g087130.4 Solanum lycopersicum
Solyc02g087140.3 Solanum lycopersicum
Solyc04g005010.4 Solanum lycopersicum
Solyc05g006090.4 Solanum lycopersicum
Solyc05g006100.4 Solanum lycopersicum
Sopen01g003620 Solanum pennellii
Sopen02g031880 Solanum pennellii
Sopen02g031890 Solanum pennellii
Sopen04g001020 Solanum pennellii
Sopen05g002110 Solanum pennellii
Sopen05g002120 Solanum pennellii
Sp1g21400 Schrenkiella parvula
Sp1g21405 Schrenkiella parvula
Sp1g21410 Schrenkiella parvula
Sp3g00650 Schrenkiella parvula
TAR371G0464 Trochodendron aralioides
TAR629G0556 Trochodendron aralioides
TAR629G1199 Trochodendron aralioides
THA.LOC104821068 Tarenaya hassleriana
THA.LOC104824673 Tarenaya hassleriana
THA.LOC109116916 Tarenaya hassleriana
Thecc.02G242600 Theobroma cacao
Thhalv10008082m.g Eutrema salsugineum
Thhalv10008745m.g Eutrema salsugineum
Thhalv10015676m.g Eutrema salsugineum
Thhalv10021278m.g Eutrema salsugineum
Thhalv10027437m.g Eutrema salsugineum
TPR.G13490 Trifolium pratense
TPR.G15420 Trifolium pratense
TPR.G2319 Trifolium pratense
TPR.G2321 Trifolium pratense
TPR.G25547 Trifolium pratense
TPR.G39273 Trifolium pratense
TPR.G40109 Trifolium pratense
TWI18G1158 Tripterygium wilfordii
TWI36G1443 Tripterygium wilfordii
unitig_0.g2797 Utricularia gibba
unitig_699.g19928 Utricularia gibba
vmacro01196 Vaccinium macrocarpon
vmacro01197 Vaccinium macrocarpon
vmacro12906 Vaccinium macrocarpon
vmacro18229 Vaccinium macrocarpon
vmacro18232 Vaccinium macrocarpon
VMungo0251G3618 Vigna mungo
VMungo0464G2061 Vigna mungo
VMungo1215G1997 Vigna mungo
Zm00001eb371950 Zea mays

User provided reference genes

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