Gene: Carub.0001s2352

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0001s2352
Transcript Identifier Carub.0001s2352.1
Gene Type Coding gene
Location scaffold_1 : 8439319-8441248 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001690
#Genes/#Species 383/98
Phylogenetic origin

ID ORTHO05D002627
#Genes/#Species 274/87
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Carub.0001s2352.v1.1
pacid 39228893
synonym Carubv10009379m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR33033//PTHR33033:SF11 - FAMILY NOT NAMED // RNASE H DOMAIN-CONTAINING PROTEIN

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0004523	IEA	InterPro	RNA-DNA hybrid ribonuclease activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G24090

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G01410
GO:0009534	ISO	PLAZA Integrative Orthology	chloroplast thylakoid	AT1G24090

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011320	Ribonuclease H1, N-terminal
IPR012337	Ribonuclease H-like superfamily
IPR036397	Ribonuclease H superfamily
IPR037056	Ribonuclease H1, N-terminal domain superfamily
IPR002156	Ribonuclease H domain
IPR009027	Ribosomal protein L9/RNase H1, N-terminal

Mapman id	Description
15.3.6.2.2	RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.ribonuclease (RNH1)